Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1790 |
Symbol | |
ID | 8368700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013164 |
Strand | + |
Start bp | 53654 |
End bp | 54502 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 644984716 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003142367 |
Protein GI | 256821168 |
COG category | [S] Function unknown |
COG ID | [COG3708] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.191731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATAA TGAAATCTTT TAACTTAGCA ATAGACTATA TTGAAGATAA CTTAACTGAT GAACTTGATG AAAAAGAAAT AACACGGATA ACAGGATATT CATTTCCAAT GTTTTCAAGA ATATTTTCAA TCGTATCAGG ATATTCATTA TCTGAATATA TAAGATTAAG AAAGATGACA AATGCTGCAA TTGATTTAAA AAATTCAGAT AAAAGAATTA TAGATATTGC AATAAAATAT GGTTATAATT CTCAGGATTC TTTTGCTTTA GCTTTTAAAA GTTTTCACAA GCTAACTCCA GGTCAAGTAA AAAAAGGAGA AAAGTATCAA TATTTCTCAA GAATCTACTT TTCAATTTCA GTTCAAGGAG GAAATCAAAT GGATATTAAG ATTGAGAAAA AGAAAGCGTT TAAAGTAGCT GGTATTAAAT CAGATGTAAC TAAAAGTTCA AATTTCCCAA AAGTTTGGGA TAGATTGGTT GAAAAAGTAC CAAGAGAAAA ATTTGAAGAG TTTGGTAGTG GTCAAATCTT TGGCGTAGGA TATGACTATA TAATGGATGA AGAAGATTCA TTTATATATT TAGCTGGTTT TGATTTAACG GATGAAGTAA AAGCTAAAGA GTTAGGTTTG GATACGCTTA GCATTCCTGA AAAAGAGTAT GCTATTGTAA GCTTACAAGG ACCTATACCA AAGTGTATTC ACGAAGGATG GAAGTATATT ATTTCATATT TCTTCCCTAA AGAAGGATAT AGACATGATG AAAGTCCTGA TTTTGAAGTA TATGGAGATG GAGACCCTAA TTCAGAAGAT TATAAAATGG AATTATGGGT TCCTATAGTA AAAGAGTAA
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Protein sequence | MDIMKSFNLA IDYIEDNLTD ELDEKEITRI TGYSFPMFSR IFSIVSGYSL SEYIRLRKMT NAAIDLKNSD KRIIDIAIKY GYNSQDSFAL AFKSFHKLTP GQVKKGEKYQ YFSRIYFSIS VQGGNQMDIK IEKKKAFKVA GIKSDVTKSS NFPKVWDRLV EKVPREKFEE FGSGQIFGVG YDYIMDEEDS FIYLAGFDLT DEVKAKELGL DTLSIPEKEY AIVSLQGPIP KCIHEGWKYI ISYFFPKEGY RHDESPDFEV YGDGDPNSED YKMELWVPIV KE
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