Gene Apre_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1546 
Symbol 
ID8398358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1682171 
End bp1682512 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content36% 
IMG OID644995910 
Productribosomal protein L17 
Protein accessionYP_003153288 
Protein GI257067032 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0203] Ribosomal protein L17 
TIGRFAM ID[TIGR00059] ribosomal protein L17 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGATA AAAGAAAACT TGGCAGAAGA ACTGACCACA GAAATGCTAT GCTTAGAAAC 
CTTGTGCAAT CACTATTAGA AAATGGTAGA ATCGAAACTA CTGTAACTAG AGCTAAAGAA
GCACAAAAAA TGGCTGATAA AATGATTACA CTAGGAAAGA AGAATACACT TCACACAAGA
AGACAAGCAG CAGCTTATTT GTATAAGGCA GAAACTGTTC AAAAATTATT TAACGAAATC
GCACCAAATT ATGAAGATAG AAACGGTGGA TACACAAGAG TACTAAAACT AGGACCAAGA
AGAGGCGACG GATCTGAACG TGCTATTCTT GAATTAGTAT AA
 
Protein sequence
MADKRKLGRR TDHRNAMLRN LVQSLLENGR IETTVTRAKE AQKMADKMIT LGKKNTLHTR 
RQAAAYLYKA ETVQKLFNEI APNYEDRNGG YTRVLKLGPR RGDGSERAIL ELV