Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1536 |
Symbol | |
ID | 8398348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1671353 |
End bp | 1671937 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644995900 |
Product | ribonuclease H |
Protein accession | YP_003153278 |
Protein GI | 257067022 |
COG category | [R] General function prediction only |
COG ID | [COG3341] Predicted double-stranded RNA/RNA-DNA hybrid binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000285387 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATT ACGCAGTAAA AAGGGGAAGG AATCCTGGGA TATACACATC CTGGGATTCT TGCCTTAAGG AAGTAAAGGG ATTTTCCAAT GCGAGCTACA AGTCCTTTAA GAAAAAGGAA GATGCTATAG CCTTTATGGA AGATAGAAAA GAGACGATTG AAGTAGACGA TGAAACAATA ATAGCCTATG TGGATGGGTC TTATAATCTT AAGGAGAAGA TCTACGGGGC AGGGGTTGTC TACATAAGTA AGGACGGAGA AGAAGAGCTC TACGAATCCT ACACAGATGA CTTTTACAAG CACAGGAATG TAGCAGGAGA GGTCAGGGCA AGTGAGCTTG CTATAAAAAA GGCCCTGGAA GAAAAAAGAG AAAAAATAAT AATCTATCAC GACTACCAGG GAATTTCCTC CTGGGCCAAT GACGAATGGA AGGCCAATAA CGCACTTACT ATCTCTTACA AAAACTTTGT AAAAGAAGCG AGAAAGAGCC TAAAGATAGG CTTTGTCAAG GTCAAGGGAC ATTCCAACGA TAAGTACAAC GACTGGGCAG ATAGGCTCGC TAAAAAGGGT GCCCTAGTTG AATAA
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Protein sequence | MKYYAVKRGR NPGIYTSWDS CLKEVKGFSN ASYKSFKKKE DAIAFMEDRK ETIEVDDETI IAYVDGSYNL KEKIYGAGVV YISKDGEEEL YESYTDDFYK HRNVAGEVRA SELAIKKALE EKREKIIIYH DYQGISSWAN DEWKANNALT ISYKNFVKEA RKSLKIGFVK VKGHSNDKYN DWADRLAKKG ALVE
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