Gene Apre_1470 details

Gene Information

• Locus tag: Apre_1470
• ID: 8398280
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerococcus prevotii DSM 20548
• Kingdom: Bacteria
• Replicon accession: NC_013171
• Strand: -
• Start bp: 1606288
• End bp: 1608111
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 644995833
• Product: GTP-binding protein TypA
• Protein accession: YP_003153212
• Protein GI: 257066956
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGAG AAGATATTAG AAATGTAGCC ATTATAGCCC ACGTTGACCA TGGTAAGACA 
ACCCTAGTGG ATGGTCTTTT GAGGACTAGT GGTTTATTTA GAGATAACCA AGAAGTAAAT 
GAGAGAGTAA TGGATTCAAA CACTATCGAA AAGGAACGTG GAATCACAAT TCTTTCCAAA 
AATACTGCTG TTTTCTATAA AGATAAGAAG ATTAACATTA TAGACACTCC AGGCCACGCT 
GACTTCGGTG GAGAGGTAGA GAGAGTCCTA AACATGGCAG AGTCTGTTGT CCTTGTAGTT 
GACAGCCACG AAGGCCCAAT GCCACAGACA AAGTTCGTCT TAAAGAAGGC AATCGAGCTA 
GGTCTTCCTG CAATTATCTG TATTAACAAG GTAGATAGGC CAGATCAAAG AATTGACGAA 
GTAGAAGATG AAATCCTAGA TCTTTTCATA AGTCTGGATG CAGATGAGTC CTACCTAGAA 
AGTCCTTTCG TTTACGCTTC AGCCAAAAAT GGTTGGGCAT CAAACGAAAA GGGAACTGTC 
AAGGAAGATA TGACCGACCT TCTAGATACT ATTATAGACT ACACCCCAGC ATTTGAGGCA 
GACGAAGATG CACCATTCAA GGTCCTAGTT TCTACCACTG ACTACAACGA ATACCTTGGA 
AGAATCGCAA TTGGTAAGGT AGAAAGCGGT GTGATTAAGA AAAATGATAA CGCAGTAATC 
ACCAACTACA ACGACAAGGA CAGACACCTT AAGTCAAAAA TTGTTACAAT CTACGAGTTC 
GATGGACTTG AGAGAAAGGA AGTCGAAGAG TCTAAGTTTG GTTCAATCGT TGCCCTTTCT 
GGTATGGAAG ATATCAACAT AGGAGATACT ATAGGAACAG AAAGTGATTC TGAGCCAATC 
GAGTTTACCA AGATTTCTGA GCCAACCCTA TCTATGACCT TTTCTGTAAA TGACTCACCA 
TTTGCAGGTC GTGATGGAAA ATATGTAACA AGTAGACACC TTAGAGACAG ACTCCTTAAG 
GAAAAAGAAA CAGATGTTTC CCTAAGAGTT GAAGCAACAG ATACAACAGA AGCCTTCAAG 
GTATCAGGCC GTGGCGAGCT CCACCTTTCA GTTCTTATCG AAAACCTAAG ACGTGAAGGC 
TATGAATTCC AAGTATCAAA GCCAGAAGTT ATGTTTAAGG AAGATGAAAA CGGAAAGAGA 
ACCGAGCCAA TCGAAATTGC CACAATTGAT GTAGACCAAG AATATTCTGG ATCTATCATA 
GAAAAACTCG GCCGCAGGAA GGGTGAGATG ATCGATATGA AACCATCAAG CTCAGGCTAC 
AACAGACTAG TCTTCAGGAT TCCTGCTAGA GGCCTTATAG GCTACAGGAC AGAGTTTATG 
ACAGATACCA AGGGTACAGG TATCCTTAAC TCAGAATTCG AAGGATACGA CCGTTACAAG 
GGCGATATGG AGACAAGAAG CGTAGGAAGT CTAATAGCAA GCGAGACAGG AATTGCCACA 
GCCTACGGCC TAAACTCTGC CCAAACCAGG GGCCAACTTT TCATCGAACC AAGTGATGAG 
GTCTACGAAG GACTTATAGT TGGAATGAAC GCCAAGGGAC TTGACATAGA CGTAAATGTC 
TGCAAGAAGA AAAAGCTCAC CAACACTCGT GCTAGCGGAA GCGATGATGC TATAATGCTA 
ACACCTGCCA AAAAAATGTC AGTTGAAGAG ATGATGGAAT TTGTAGAAAA AGATGAGCTA 
ATCGAAATTA CACCAAATCA CCTAAGAATT AGAAAAAGAA TTCTAGATTC AAACCTAAGG 
TATAAGTCAA AGAAAAATAA TTAG 

 

Protein sequence

MKREDIRNVA IIAHVDHGKT TLVDGLLRTS GLFRDNQEVN ERVMDSNTIE KERGITILSK 
NTAVFYKDKK INIIDTPGHA DFGGEVERVL NMAESVVLVV DSHEGPMPQT KFVLKKAIEL 
GLPAIICINK VDRPDQRIDE VEDEILDLFI SLDADESYLE SPFVYASAKN GWASNEKGTV 
KEDMTDLLDT IIDYTPAFEA DEDAPFKVLV STTDYNEYLG RIAIGKVESG VIKKNDNAVI 
TNYNDKDRHL KSKIVTIYEF DGLERKEVEE SKFGSIVALS GMEDINIGDT IGTESDSEPI 
EFTKISEPTL SMTFSVNDSP FAGRDGKYVT SRHLRDRLLK EKETDVSLRV EATDTTEAFK 
VSGRGELHLS VLIENLRREG YEFQVSKPEV MFKEDENGKR TEPIEIATID VDQEYSGSII 
EKLGRRKGEM IDMKPSSSGY NRLVFRIPAR GLIGYRTEFM TDTKGTGILN SEFEGYDRYK 
GDMETRSVGS LIASETGIAT AYGLNSAQTR GQLFIEPSDE VYEGLIVGMN AKGLDIDVNV 
CKKKKLTNTR ASGSDDAIML TPAKKMSVEE MMEFVEKDEL IEITPNHLRI RKRILDSNLR 
YKSKKNN