| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1416 |
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| Symbol | |
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| ID | 8398226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 1530649 |
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| End bp | 1531389 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644995781 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003153160 |
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| Protein GI | 257066904 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAGAA ATGTACTTCT AGAAACAGCC TACGATGGGA CGAACTTTGC AGGCTTTCAA
TACCAAAAGG ACGAAAGAAG CGTAGAAGAA GAGTTAAGAA ATGCTATAAG AAAGGTTACG
GGAGAGGATA ATAGGATTGT ATCCTGCGGG AGGACCGACA GTGGAGTTCA CGCCAGAAGC
CACTTCGTAA ACTTCCTTAC AGCATCTAAT ATAAGTCCCA AGGCCTTTAG CTTCCATATC
CAGCCCCACT TACCAGATGA TATATTGGCC CTTTCTTCGA AGGAAGTTAG CCTAGACTTT
CATGCGAGAT TTTCCTGTAA GTCCAAGCTT TATAAGTATG TGATCTACAG GGGAAGGCTC
ATGTATCCAG TCTTTAGGAA CTACAAGGAA GAAATATCCT ACCCCCTAGA CCTAAAAAGA
TTGGATCAGG GTCTTAAGAT CCTAGAGGGC GAGCATGACT TTAGGCTATT TATGAGAGAG
GATAAAAAGC TTAAGATAAA TACAGTAAGG AAGATCGACG AGGCCTACTT CGAGGAAGAA
GGAGATGACC TTGCTATTTA TTTTAAGGGG GAATCTTTCC TCCATAACCA GGTAAGGATC
ATGGTAGGAT CTCTTATAGA GCTTAGCCGA GGAAGGCTTA GCCTAGATGA TTACAGGAAG
TTTTTCGATA AGGACAATAA TAAAAGAGCA AATCCCGCCT TGGGAGCCCA GGGCCTATAC
TTGCGGAGGG TAGAATTTTG A
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| Protein sequence | MIRNVLLETA YDGTNFAGFQ YQKDERSVEE ELRNAIRKVT GEDNRIVSCG RTDSGVHARS
HFVNFLTASN ISPKAFSFHI QPHLPDDILA LSSKEVSLDF HARFSCKSKL YKYVIYRGRL
MYPVFRNYKE EISYPLDLKR LDQGLKILEG EHDFRLFMRE DKKLKINTVR KIDEAYFEEE
GDDLAIYFKG ESFLHNQVRI MVGSLIELSR GRLSLDDYRK FFDKDNNKRA NPALGAQGLY
LRRVEF
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