Gene Apre_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1342 
Symbol 
ID8398149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1445836 
End bp1446189 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content37% 
IMG OID644995704 
Productribosomal protein L20 
Protein accessionYP_003153086 
Protein GI257066830 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00397655 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAG TAAAAAGAGC AGTAAACGCT AAAAAAAGAC ACAAAAAAGT ATTAAAACAA 
GCTAAAGGAT ACTACGGTTC CAAGAGCCTT CTATTCAGAA CAGCTAACCA AGCTGTAATG
AAATCTCTTA ACTATGCTTA CATCGGAAGA AAGCACAGAA AAAGAGACTT CAGAAAACTA
TGGATCGCTA GAATCAACGC AGCAGCAAGA CTTAACGGAA CAAGCTATTC TAAATTTATG
GGTAACCTTA AGAAAGCAAA CATCGACATC AATAGAAAAA TGCTTGCTGA GCTTGCAGTA
AACAACCCAG AAGAATTCGC TAAACTTGTA GAGCTTGCAA ACCAAGTAGC TTAA
 
Protein sequence
MARVKRAVNA KKRHKKVLKQ AKGYYGSKSL LFRTANQAVM KSLNYAYIGR KHRKRDFRKL 
WIARINAAAR LNGTSYSKFM GNLKKANIDI NRKMLAELAV NNPEEFAKLV ELANQVA