Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1298 |
Symbol | |
ID | 8398088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1393745 |
End bp | 1394623 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 644995643 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003153042 |
Protein GI | 257066786 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0435661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATG AAAGAAAAGA ATTTGGCAAA AAACTAATAG AAATAAGAGA AAGAAAAGGC CTAAGACAGG CTGATGTAGC TGAGCTTATA AATTTGAGCG AAAGAAGTAT AGGTAGGCTT GAAAGAGGTG AAATAGAATC CGCATCCGTA GATAGTCTAA TAGAACTATC CAAAATATAT GACCTGGATA TCCTAAGCTT ATACAAAAAA TATATTTATG GAAGTTTTTA TATACTAGAA GAAATCAAGA ATTCACTAGA CATAAACGCA ATGTTTCTAA CAAAGGATAT AAGAATAGAC CTTTTAGAAA AAATAGACTT AATAAAAGAT AGCAGAGAAC TAAAAGCAAG AAAATATGAG ATAGAGCTCC TAGATTTATT TATACGATAT TTAAATTTTG AGATAACTAG CGAAGAATTA AGTGAAGTAT ACGAGGACCT GTCCTCAAAT AAGATTAAAA GAAAAAACTT CGAAAATCTC GACCTTCAAG ACATAGACCT CCGCATATTA TTAAATATAG CAACTACTTC CCAAGATTTT AAGGGAATTG ATAGGGTGGA GATATTTGAG AAATGTAAGA GGCAGTCTTT TAATAGTGAA TTAAAAATAT TATCAATTAA CAACCTTGCT AACTTATACT TTAGAAATGA GTGCTATGAT AAAACTTTAA AAATTGTAGA TTATGGGATA GAATTTTCAC GTAATGAATC GCATATTTAC GGTTTGTTAT ATCTATATTT TATAAAATTT ACTACCCAAT ACACATCATA TAAAGAATAT AGCGAATCAT TAAATTCTAC TCTAATCTTG CTAAAAAATA TAAATAATGA GGACTTGAAG CAGTTGATGT ATAGAAACAT ACAAAACATA TTAAGCTAA
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Protein sequence | MTDERKEFGK KLIEIRERKG LRQADVAELI NLSERSIGRL ERGEIESASV DSLIELSKIY DLDILSLYKK YIYGSFYILE EIKNSLDINA MFLTKDIRID LLEKIDLIKD SRELKARKYE IELLDLFIRY LNFEITSEEL SEVYEDLSSN KIKRKNFENL DLQDIDLRIL LNIATTSQDF KGIDRVEIFE KCKRQSFNSE LKILSINNLA NLYFRNECYD KTLKIVDYGI EFSRNESHIY GLLYLYFIKF TTQYTSYKEY SESLNSTLIL LKNINNEDLK QLMYRNIQNI LS
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