Gene Apre_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1298 
Symbol 
ID8398088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1393745 
End bp1394623 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content29% 
IMG OID644995643 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003153042 
Protein GI257066786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0435661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATG AAAGAAAAGA ATTTGGCAAA AAACTAATAG AAATAAGAGA AAGAAAAGGC 
CTAAGACAGG CTGATGTAGC TGAGCTTATA AATTTGAGCG AAAGAAGTAT AGGTAGGCTT
GAAAGAGGTG AAATAGAATC CGCATCCGTA GATAGTCTAA TAGAACTATC CAAAATATAT
GACCTGGATA TCCTAAGCTT ATACAAAAAA TATATTTATG GAAGTTTTTA TATACTAGAA
GAAATCAAGA ATTCACTAGA CATAAACGCA ATGTTTCTAA CAAAGGATAT AAGAATAGAC
CTTTTAGAAA AAATAGACTT AATAAAAGAT AGCAGAGAAC TAAAAGCAAG AAAATATGAG
ATAGAGCTCC TAGATTTATT TATACGATAT TTAAATTTTG AGATAACTAG CGAAGAATTA
AGTGAAGTAT ACGAGGACCT GTCCTCAAAT AAGATTAAAA GAAAAAACTT CGAAAATCTC
GACCTTCAAG ACATAGACCT CCGCATATTA TTAAATATAG CAACTACTTC CCAAGATTTT
AAGGGAATTG ATAGGGTGGA GATATTTGAG AAATGTAAGA GGCAGTCTTT TAATAGTGAA
TTAAAAATAT TATCAATTAA CAACCTTGCT AACTTATACT TTAGAAATGA GTGCTATGAT
AAAACTTTAA AAATTGTAGA TTATGGGATA GAATTTTCAC GTAATGAATC GCATATTTAC
GGTTTGTTAT ATCTATATTT TATAAAATTT ACTACCCAAT ACACATCATA TAAAGAATAT
AGCGAATCAT TAAATTCTAC TCTAATCTTG CTAAAAAATA TAAATAATGA GGACTTGAAG
CAGTTGATGT ATAGAAACAT ACAAAACATA TTAAGCTAA
 
Protein sequence
MTDERKEFGK KLIEIRERKG LRQADVAELI NLSERSIGRL ERGEIESASV DSLIELSKIY 
DLDILSLYKK YIYGSFYILE EIKNSLDINA MFLTKDIRID LLEKIDLIKD SRELKARKYE
IELLDLFIRY LNFEITSEEL SEVYEDLSSN KIKRKNFENL DLQDIDLRIL LNIATTSQDF
KGIDRVEIFE KCKRQSFNSE LKILSINNLA NLYFRNECYD KTLKIVDYGI EFSRNESHIY
GLLYLYFIKF TTQYTSYKEY SESLNSTLIL LKNINNEDLK QLMYRNIQNI LS