Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0708 |
Symbol | |
ID | 8397489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 807876 |
End bp | 809597 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644995058 |
Product | ABC transporter related |
Protein accession | YP_003152463 |
Protein GI | 257066207 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0153727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGAGT TTTATAAAAA AATATTTGCT CTTACAGATA AGGGAGCAAG AAATTTATCT AAAGCAACAC TGGCTTCATT TTTCGTTTAT TGTATAAACA TGCTTCCTGC CATATTACTA ATGATTTTTG CTCAGGAAGT TTTGGAAAAT ATGGGCAAAA GCAAGGGATT TTATATAGTA TTCTCAGTTT TGACCTTGAT AGCAATGTAT ATTTTGCTTT CTATAGAATA CGATAAATTA TATAGCACAA CCTATCAAGA AAGTGCGGAT TTAAGAATAA GGACAGCGGA GAATTTATCA AAATTACCTC TATCTTACTT TTCTAAACAT GACATTTCCG ATCTTTCACA AACAATCATG GCTGATATTG AAGGTATAGA GCATGCAATG AGCCACTCGA TACCAAAGGT GGGCGGCATG GTACTGTTTT TTCCATTAAT ATCTGTAATG ATGCTAATAG GTAATGTCAA GATGGGCTTA GCTGTAATTA TTCCATCTCT TTTAAGCTTT ATATTCATAC CCTTATCTAA AAAATATCAA GTTGATGGAC ATAAAAGATA TTATGGTGTC TTAAGAAAAA ACTCAGAAAG TTTTCAGGAA AATATAGAAA TGCAAATGGA GATTAAAGCA TATAATTTGT CGAAAGATAT TAAAGATGAC TTATATAAAA AAATGGAAGA GAGTGAGAGA GTACACTTAA AGGCGGAAAT AACTACAATT TTAACTATGT CTATATCTTC AATATTTAGC TTTATTTCCC TTGCTGTCGT AATACTTGTT GGCGTAAATC TAATTATTAG TAAAGAGATA AGTGCCCTCT ACCTTGTAGG ATATTTACTA GCGGCTATGA AGATAAAAGA TTCTCTAGAC GCATCTAAAG AGGGTTTGAT GGAAATATTT TATTTATCGC CAAAAATTGA AAGATTAAAA GAAATTCAAA ATCAAGATTT ACAAGAAGGC GAAGACTATA ATCTGAAAAA ATTTGATATT GATCTAAAAG ATGTTGAGTT TGCCTACAAT AAAGACGCAA AAGTTTTAAA TGGAGTAAGC TTTAAAGCTA AGCAGGGAGA GGTTACTGCT TTGGTAGGTG CAAGCGGATG CGGCAAAACA ACTATCTTGA AACTTATATC AAGACTTTAT GATTACGACG AGGGACAAAT CTTAATTAAT GGCAAAGATA TAAAAGAAAT ATCAACAGAA TCCCTTTTTG ATAAGGTCTC TATTGTTTTC CAAGATGTGG TTCTCTTTAA TCAAAGTGTT ATGGAAAATA TTAGAATCGG AAAGCAAGAT GCAAGCGATG AAGAAGTTAA AAGAGCAGCA AAACTTGCAA ATTGCACAGA CTTTATAGAA AAAATGGATA AGGGTTTCGA TACAGTTATT GGTGAGAATG GAGCTGAGCT ATCAGGCGGA GAAAGACAAA GAGTATCAAT AGCCAGAGCC TTCTTAAAAG ATGCACCGAT ATTAATCTTA GATGAGATAG CAGCAAGCCT TGATGTTGAC AACGAGAAAA AGATTCAAGA GTCATTAAAT AATTTAATTA AAGATAAAAC TGTTGTTATT ATTTCACATA GAATGAAATC TATAGAAAAT GCAGATAAGA TAGTAGTTCT TGAAAACGGA AGAGTAGAAA GCGAAGGCAA ACATGAAGAG CTTTTAAAAA AATCAAAAGT TTATAGGAAC TTAATAGAAA AGACAAAAAT GGCAGAAGAA TTTATTTATT AG
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Protein sequence | MKEFYKKIFA LTDKGARNLS KATLASFFVY CINMLPAILL MIFAQEVLEN MGKSKGFYIV FSVLTLIAMY ILLSIEYDKL YSTTYQESAD LRIRTAENLS KLPLSYFSKH DISDLSQTIM ADIEGIEHAM SHSIPKVGGM VLFFPLISVM MLIGNVKMGL AVIIPSLLSF IFIPLSKKYQ VDGHKRYYGV LRKNSESFQE NIEMQMEIKA YNLSKDIKDD LYKKMEESER VHLKAEITTI LTMSISSIFS FISLAVVILV GVNLIISKEI SALYLVGYLL AAMKIKDSLD ASKEGLMEIF YLSPKIERLK EIQNQDLQEG EDYNLKKFDI DLKDVEFAYN KDAKVLNGVS FKAKQGEVTA LVGASGCGKT TILKLISRLY DYDEGQILIN GKDIKEISTE SLFDKVSIVF QDVVLFNQSV MENIRIGKQD ASDEEVKRAA KLANCTDFIE KMDKGFDTVI GENGAELSGG ERQRVSIARA FLKDAPILIL DEIAASLDVD NEKKIQESLN NLIKDKTVVI ISHRMKSIEN ADKIVVLENG RVESEGKHEE LLKKSKVYRN LIEKTKMAEE FIY
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