Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0540 |
Symbol | |
ID | 8397317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 624968 |
End bp | 625666 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644994898 |
Product | lipopolysaccharide biosynthesis protein |
Protein accession | YP_003152307 |
Protein GI | 257066051 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3944] Capsular polysaccharide biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAC AAGAAATTGA TTTAATTGAA TTGTCTAAGA AAATCGGCAA GCATCTTCCT ATGATTATAA TATTTTCTAT TATAGTAGGT GCGGCAAGTT TTCTTCTATC TAAGTTTGTC ATCACTCCTA AGTATGATTC AAATACTACC ATGATAGTAA GCAATTCAAA TCAAAACAAT GACCCAAATA ACCCGCAAAC TAACGTAGAG CTAGGACAAA TTCAAGCCAA CAAGGCCCTC ATTTCTACAT ACTCAGAGAT AGTTAAGTCA AAGGGCATTG CTGAAAGAGT AATAAATAAT CTAGGACTTG ATATGGACTA TGAAGAATTT TCATCTAAGG TTTCAATCGA ACCTGTCAAA GATACTCAAA TTATCTCTGT AAAGGTAGTA GATACAATTC CAGAAAGAGC TATGGATATA GCAAATGAAA CTGCCAATAT TTTTAAATCT TCTATTGGAG AGATTATGAA TGTTGACAAT GTCCAAATTC TCGATGGGGC AATCCTACCA GAAGAAGCTT CTTCACCAAA TATCAAGAAA AATACAGCTA TAGGTATAAT CCTTGGTTTT GTTCTTGGAG TAGCTGTTGT TCTATTTAAG GAAATAGCAG ACTCATCTGT CAAATCAAGC GAAGAAGTTA CAGAATATTT CGATATACCA GTTATTGGTA TAGTGCCAGA TAGTGAACAA GGAAATTAA
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Protein sequence | MNEQEIDLIE LSKKIGKHLP MIIIFSIIVG AASFLLSKFV ITPKYDSNTT MIVSNSNQNN DPNNPQTNVE LGQIQANKAL ISTYSEIVKS KGIAERVINN LGLDMDYEEF SSKVSIEPVK DTQIISVKVV DTIPERAMDI ANETANIFKS SIGEIMNVDN VQILDGAILP EEASSPNIKK NTAIGIILGF VLGVAVVLFK EIADSSVKSS EEVTEYFDIP VIGIVPDSEQ GN
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