Gene Apre_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0484 
Symbol 
ID8397259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp554139 
End bp554669 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content38% 
IMG OID644994841 
Productsingle-strand binding protein 
Protein accessionYP_003152252 
Protein GI257065996 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000759205 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG TTATCCTTAT CGGAAGACTC GTAAGAGATC CTGAGTTGAG ATATACTCAA 
TCTCAAAGAG CCGTATGTAC ATTTACATTG GCAGTAGATA AGAGACTTAG CAGAGAGAGA 
AAGAACGAAC TGGAAGCTCA AAATCGTCCG ACAGCTGATT TTCTAAGAAT TACCGTTTGG 
GGAGTTCAAG GAGAAAATGC CAGCAAATAC CTCAGAAAAG GAAGTCAATG CGCAGTAGAT 
GGTAGAATCG AAACAGGTTC CTACCAAGAT AGAGAAACAG GTAAGACTGT CTATACAACT 
GATGTTGTAG CAGATAATGT TGAATTTATA GGATCGAGAT CTGACAATCA ATCTTCTGGA 
TTTAACAACA ACAGCTACGA CAATCAAGAT ACCTACAGAA ATGACTATTC ACAAACAAAC 
AACTACCAAC AAAACAGGGG AAATAATAAT AACCAAGCTT TTGAAGGTGG AGATGATTTC 
TTTGATGATG ACTTTACTGA GATTGAGGAT GATGGAAGGA TTCCATTCTA A
 
Protein sequence
MNKVILIGRL VRDPELRYTQ SQRAVCTFTL AVDKRLSRER KNELEAQNRP TADFLRITVW 
GVQGENASKY LRKGSQCAVD GRIETGSYQD RETGKTVYTT DVVADNVEFI GSRSDNQSSG 
FNNNSYDNQD TYRNDYSQTN NYQQNRGNNN NQAFEGGDDF FDDDFTEIED DGRIPF