Gene Apre_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0311 
Symbol 
ID8397085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp345830 
End bp346372 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content39% 
IMG OID644994671 
Producthypothetical protein 
Protein accessionYP_003152083 
Protein GI257065827 
COG category[S] Function unknown 
COG ID[COG4129] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAA TATCAACCAT AAAAAGACCG GGCCTTAGGA TAATAAAAAC AGTCCTCGCC 
GTATTTCTTT CCATGGTAAT ATCAGAACTA AGACCAGGAG AAGGCCTTCC AATAAATTCT
TCCATAGCGG CGATAATCTC TATGCAGACC AACCTAGTAA ATACGAAAGA TATAGGTATA
AACAGGGTAA TAGGAACAAT CCTTGGAGGT ATCATAGGAC TAATCTATCT AATAGTGATC
CCAGATTTCA AGGATCCCTA CATCCTAGAC TTCTTCCTAA TGAGCCTAAT AGTAGGCCTA
ATAATATGGA TCATGGCCCA CCTAAAACGC TACAACGCCC TAACCATAAT GGCCATAGTA
TTCCTATCAA TCACCCTAGA TAACGTAAAC CAAACAACAG ACCTCCCAGT ACTTTTCGCC
TTCAACAGAA CCCTAGATAC ACTGATAGGA GTGGTAATAT CGATAATAAT AAACGGAGCG
GAAATTTCTT ATAGGAAAAG AAAGTTTCTT AAGAAAAATG GGATAGACAA GTGGGAGAGG
TAG
 
Protein sequence
MAKISTIKRP GLRIIKTVLA VFLSMVISEL RPGEGLPINS SIAAIISMQT NLVNTKDIGI 
NRVIGTILGG IIGLIYLIVI PDFKDPYILD FFLMSLIVGL IIWIMAHLKR YNALTIMAIV
FLSITLDNVN QTTDLPVLFA FNRTLDTLIG VVISIIINGA EISYRKRKFL KKNGIDKWER