Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0291 |
Symbol | |
ID | 8397065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 325101 |
End bp | 325583 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644994651 |
Product | protein of unknown function DUF163 |
Protein accession | YP_003152063 |
Protein GI | 257065807 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0186032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATAA AGATAGTCGC AGTAGGAAAG ATTAAGGAGA AGTTCTATAG GGATGCTATA GATGAATATA TCAAAAGGAT GGGAGCCTAC AATAATATTG AAATTGTAGA AGTGGCAGAT ATTATGGCGC CCGAAGGCCT TTCTGAAAAG GAGCTTGAAG ATATAAAGGA TAAGGAAGGG GAAAAGATCC TATCCAAAAT CAAGGACGGA GCCTTCCTTG TGACTTTAGA AATCCTAGGT AAAGAGATGA CTAGCGAGGA CTTCGCAGAC TTTATCAAAG ATGAGATGCT TATGGGAGGG GGAAGAGATT TAGTTTTTGT AATAGGCGGA TCGAATGGTC TTTCCAAAAA TGTAACGGGG CGTGCTAATA AGAAGCTTTC CTTTGGCAAG TTTACCTATC CCCACCAGCT TATGAGAGTT ATCCTTTCAG AGCAAATATA CAGGGCCTTT AGGATAATAA ATAACCATCC TTATCACAAA TAA
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Protein sequence | MNIKIVAVGK IKEKFYRDAI DEYIKRMGAY NNIEIVEVAD IMAPEGLSEK ELEDIKDKEG EKILSKIKDG AFLVTLEILG KEMTSEDFAD FIKDEMLMGG GRDLVFVIGG SNGLSKNVTG RANKKLSFGK FTYPHQLMRV ILSEQIYRAF RIINNHPYHK
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