Gene Apre_0291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0291 
Symbol 
ID8397065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp325101 
End bp325583 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content39% 
IMG OID644994651 
Productprotein of unknown function DUF163 
Protein accessionYP_003152063 
Protein GI257065807 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0186032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAA AGATAGTCGC AGTAGGAAAG ATTAAGGAGA AGTTCTATAG GGATGCTATA 
GATGAATATA TCAAAAGGAT GGGAGCCTAC AATAATATTG AAATTGTAGA AGTGGCAGAT
ATTATGGCGC CCGAAGGCCT TTCTGAAAAG GAGCTTGAAG ATATAAAGGA TAAGGAAGGG
GAAAAGATCC TATCCAAAAT CAAGGACGGA GCCTTCCTTG TGACTTTAGA AATCCTAGGT
AAAGAGATGA CTAGCGAGGA CTTCGCAGAC TTTATCAAAG ATGAGATGCT TATGGGAGGG
GGAAGAGATT TAGTTTTTGT AATAGGCGGA TCGAATGGTC TTTCCAAAAA TGTAACGGGG
CGTGCTAATA AGAAGCTTTC CTTTGGCAAG TTTACCTATC CCCACCAGCT TATGAGAGTT
ATCCTTTCAG AGCAAATATA CAGGGCCTTT AGGATAATAA ATAACCATCC TTATCACAAA
TAA
 
Protein sequence
MNIKIVAVGK IKEKFYRDAI DEYIKRMGAY NNIEIVEVAD IMAPEGLSEK ELEDIKDKEG 
EKILSKIKDG AFLVTLEILG KEMTSEDFAD FIKDEMLMGG GRDLVFVIGG SNGLSKNVTG
RANKKLSFGK FTYPHQLMRV ILSEQIYRAF RIINNHPYHK