Gene Apre_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0288 
Symbol 
ID8397062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp322231 
End bp323268 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content43% 
IMG OID644994648 
Producthypothetical protein 
Protein accessionYP_003152060 
Protein GI257065804 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1361] S-layer domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.12266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCGA ATCTTAACCC GACAGAAACT ACAAATACAG CTGAAACTTC CTCTGGCCAA 
GCTAGCCCAG GGGCAAATGA TATAGGCTCT TCCCAAGGTC CTATCAAAAA TCAACCCAAG
CTTATAATCT CAGACTATGA GCTTAGCCCA ACTATAGCAG AGGCAGGGGA GAACTTCGAC
CTATCCTTTA CCCTCTATAA CACTAATAAC GAAAACACTA TCTATAATCT CAAGGTTACC
CTAGAGCAAA CCCTGGCATC CGCTCCACAA AATACGAGCA CTGCCAACAA TACCCTAGTA
TCGGACGGAT CTGTCTTTAC ACCAGTTGAT AGGTCAAATA CCTTCTATGT AGCGGCCCTC
TACCCTTGGG ATTGGACTAG TAAATACATA ACAATGAGCG TCCTACCAAA TGCAACTCCA
GGTCCTTATG TGGTAAATCT CACAATGGAA TACGAAGACT ATTGGGGAAA CCAATACAAG
AGCACAGAGA CTATAGGCAT CCCTGTAGCC CAAAGGTCTG GGGTGAATTT CGGCAAGGTC
AAATTGGGAG AGCTAAATGC CAATACTCCT GGATCTTTAT CTGTAAATAT TTATAACACA
GGAAAAGACA ATCTCGATAC GGTAATGGTA AGGGTCAAGG GAGATGGCTT CGACGTAGAT
GAAAACGAGA GATTTATCGG AAACTTCAAT GCAGGAAGCA CGGAGACCTT CTCTTGTAAC
ATAACTCCTA AATCTGAAGG TAAGGTCTCT GGAACTATAG AGATAATCTA CGAAGACTCC
AGGGGCAAGG CCTACAAGAA GACTAAGGAA TTTAGTACTG AGGTAATGGG AGGATTTGAA
GGAGAAAACG GAATGATCGA TCCTGAAACA GGAGAGATGA TAGGAGAGGC TCCTCCAATG
GAAGAAAACT CATCAGTACT TTCGTCTCCA TTTATCTGGA TAGGAATTAT AGTCCTTGCA
GCCCTCCTTC TCATACTTTT GAAGAAGAAA AGAAAGGCTA AAAAAGACGA GGAGCTAATA
ATAGACGATG AAGATTAG
 
Protein sequence
MMANLNPTET TNTAETSSGQ ASPGANDIGS SQGPIKNQPK LIISDYELSP TIAEAGENFD 
LSFTLYNTNN ENTIYNLKVT LEQTLASAPQ NTSTANNTLV SDGSVFTPVD RSNTFYVAAL
YPWDWTSKYI TMSVLPNATP GPYVVNLTME YEDYWGNQYK STETIGIPVA QRSGVNFGKV
KLGELNANTP GSLSVNIYNT GKDNLDTVMV RVKGDGFDVD ENERFIGNFN AGSTETFSCN
ITPKSEGKVS GTIEIIYEDS RGKAYKKTKE FSTEVMGGFE GENGMIDPET GEMIGEAPPM
EENSSVLSSP FIWIGIIVLA ALLLILLKKK RKAKKDEELI IDDED