Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0288 |
Symbol | |
ID | 8397062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 322231 |
End bp | 323268 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644994648 |
Product | hypothetical protein |
Protein accession | YP_003152060 |
Protein GI | 257065804 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1361] S-layer domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.12266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGCGA ATCTTAACCC GACAGAAACT ACAAATACAG CTGAAACTTC CTCTGGCCAA GCTAGCCCAG GGGCAAATGA TATAGGCTCT TCCCAAGGTC CTATCAAAAA TCAACCCAAG CTTATAATCT CAGACTATGA GCTTAGCCCA ACTATAGCAG AGGCAGGGGA GAACTTCGAC CTATCCTTTA CCCTCTATAA CACTAATAAC GAAAACACTA TCTATAATCT CAAGGTTACC CTAGAGCAAA CCCTGGCATC CGCTCCACAA AATACGAGCA CTGCCAACAA TACCCTAGTA TCGGACGGAT CTGTCTTTAC ACCAGTTGAT AGGTCAAATA CCTTCTATGT AGCGGCCCTC TACCCTTGGG ATTGGACTAG TAAATACATA ACAATGAGCG TCCTACCAAA TGCAACTCCA GGTCCTTATG TGGTAAATCT CACAATGGAA TACGAAGACT ATTGGGGAAA CCAATACAAG AGCACAGAGA CTATAGGCAT CCCTGTAGCC CAAAGGTCTG GGGTGAATTT CGGCAAGGTC AAATTGGGAG AGCTAAATGC CAATACTCCT GGATCTTTAT CTGTAAATAT TTATAACACA GGAAAAGACA ATCTCGATAC GGTAATGGTA AGGGTCAAGG GAGATGGCTT CGACGTAGAT GAAAACGAGA GATTTATCGG AAACTTCAAT GCAGGAAGCA CGGAGACCTT CTCTTGTAAC ATAACTCCTA AATCTGAAGG TAAGGTCTCT GGAACTATAG AGATAATCTA CGAAGACTCC AGGGGCAAGG CCTACAAGAA GACTAAGGAA TTTAGTACTG AGGTAATGGG AGGATTTGAA GGAGAAAACG GAATGATCGA TCCTGAAACA GGAGAGATGA TAGGAGAGGC TCCTCCAATG GAAGAAAACT CATCAGTACT TTCGTCTCCA TTTATCTGGA TAGGAATTAT AGTCCTTGCA GCCCTCCTTC TCATACTTTT GAAGAAGAAA AGAAAGGCTA AAAAAGACGA GGAGCTAATA ATAGACGATG AAGATTAG
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Protein sequence | MMANLNPTET TNTAETSSGQ ASPGANDIGS SQGPIKNQPK LIISDYELSP TIAEAGENFD LSFTLYNTNN ENTIYNLKVT LEQTLASAPQ NTSTANNTLV SDGSVFTPVD RSNTFYVAAL YPWDWTSKYI TMSVLPNATP GPYVVNLTME YEDYWGNQYK STETIGIPVA QRSGVNFGKV KLGELNANTP GSLSVNIYNT GKDNLDTVMV RVKGDGFDVD ENERFIGNFN AGSTETFSCN ITPKSEGKVS GTIEIIYEDS RGKAYKKTKE FSTEVMGGFE GENGMIDPET GEMIGEAPPM EENSSVLSSP FIWIGIIVLA ALLLILLKKK RKAKKDEELI IDDED
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