| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1295 |
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| Symbol | |
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| ID | 8414179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1462093 |
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| End bp | 1463316 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022891 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_003180310 |
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| Protein GI | 257785093 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.865299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAACTA CACCAAAGCA TGCAAAATTG CTAGACAGCG GAGCTACACA AGGTACCTCG
GCTGATGCCG CACAAAATAC TGCAGCTGGC AGTGCACAAG GGACTGCACC TAGCGTCGCG
GCTAATGCTT CGCAGAAAAT CTCAGCTGGC ACTTCTCCTT TTAGCCGTAC GCAGGCAGAG
GGTTACCACA AGCGCCGTAA ACGTGTTTTT AGAAAACAGA TGGTGGTAAG GTCTCTTTTA
GGTGTTTTTG CGGCTGTTTT TGTTGCTGCT GTGGTAGGCG TAGGTATTTG GTACGCAAAT
GTTCAGGCGC AGCTTAATAA CTCGCAGGTC ATCACTAATG AGCTTCGCCA AACGCTTCAG
GAGCCTTCTG CACCAAGTGA TCCCTATTAT GTGCTGCTTC TAGGAACAGA TGGACGACCT
GGTGAAACCG AGTATCGTGC AGATTCCATT ATTTTGGCGC GTGTTGATCC CATTCATAAG
CGTGTGACTA TGCTTTCTAT TCCACGAGAC ACACGTGTCT TGTGGAAGGG TTCCTACATG
AAGATCAATG CCGTCCACTA CTATGACGGA GCAAATGGTA TGGTGCAGGC TGTTAACGAA
CTGTGCGGCG TACATATTGC TCACTATGCT GAGGTTAACT TCGATGGTCT TGCTGGCATT
ACAGATGCTC TTGGAGGCGT GACCGTAAAC GTTGAGCAGT ACATGCGTGA TACAGAGAAC
TTTAGCGACG TTGTTGAGCT GTATCCTGGC GTTCAGAAGC TCAACGGTGC TCAAGCACTC
TTCTTCACTC GCGTTCGTTA CGCTTTTGCA GATAGCGATT ACACTCGTAT GCGCCACCAA
AGAACGTTCA TCAAGGCCAT GATTGCTCAG ATTTTGAACA CCGGAGATCC TGTGGCCATT
GCCAATATTG TCAATTCAAC AGCAAGTATG GTCATTACTG ATTTGTCTGT CTCAGATATT
ATTTCCCTAG GTACTCAGAT GATTGGAATG AATACCGATA AGGATATCTA TACGGCATAC
GTACCATCTG AGGGAACAGA AATTGATGGC CAGTCGTATG TTATTACAGA TAAAGAAGCA
CTTGCAAAGA TGATGAAAGT GATTGATGAA GGAAACGATC CGTCTGGTTT AAATGAACAA
ACAGATGCTG AGGCAAATGC TGAAGCTACC GAGAAAAGCT CTGAAGAGTC CTCAGAATCT
CCAAACAGCT CTTCTCGCCA GTAA
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| Protein sequence | MSTTPKHAKL LDSGATQGTS ADAAQNTAAG SAQGTAPSVA ANASQKISAG TSPFSRTQAE
GYHKRRKRVF RKQMVVRSLL GVFAAVFVAA VVGVGIWYAN VQAQLNNSQV ITNELRQTLQ
EPSAPSDPYY VLLLGTDGRP GETEYRADSI ILARVDPIHK RVTMLSIPRD TRVLWKGSYM
KINAVHYYDG ANGMVQAVNE LCGVHIAHYA EVNFDGLAGI TDALGGVTVN VEQYMRDTEN
FSDVVELYPG VQKLNGAQAL FFTRVRYAFA DSDYTRMRHQ RTFIKAMIAQ ILNTGDPVAI
ANIVNSTASM VITDLSVSDI ISLGTQMIGM NTDKDIYTAY VPSEGTEIDG QSYVITDKEA
LAKMMKVIDE GNDPSGLNEQ TDAEANAEAT EKSSEESSES PNSSSRQ
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