Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1281 |
Symbol | |
ID | 8414161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1439506 |
End bp | 1440402 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645022873 |
Product | dihydrodipicolinate synthetase |
Protein accession | YP_003180296 |
Protein GI | 257785079 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.168862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACAT TTAAGGGCGT TATTGTTCCT ATGGTCACGC CGTTTAACCG CGATGAAGAG CAGTCTATCA ACTACGAAGC AGCTGAGCAG CTTCTGGAAA AGCTCATCTC TGAGGGTGCT GATGGTATCT TTACGTTTGG CTCTAACGGT GAGTTCCATG TTTGTAGTCC TGACGAGAAG ATCAAGTTCT CCAAGTTTAT TATCGAGAAA ACCGCAGGCC GTCTTCCTGT TTATGTAGGA ACTGGAGCTT GCTCAACAAA AGAGGCTCTC TATATGAGCC GCGAAGCAGA AGCAATTGGC GCCGATGCGC TTTCTGTTAT TAATCCTTAC TTCCTGGGTA TTTCTGACCA GCAGTTGATT GAGTACTTTA AGACTGTTGC TGCAAGTGTC AAAATACCTG TCCTTTTATA TAACATTCCC AAGGGAACCG GTAAAAATAT TTCTAAAGAG GTTGTTGAGC AGCTGGTGAC CATTGAAAAC ATCAAGGGCA TTAAGGACAG CTCTGGCAGT ATTGATAATC TCAAGGATTA TCTGGATGCT GCGGCTGGTC ATGACGTAGA CGTACTTGTT GGCTCTGACG GAAAGATTTC TGAGGCTCAT GCCCTTGGAG CTCAGGGTGC TATCGCAGGT ACCGCAAATC TTATTACTAA GGTTGTTGTT GACCTTTGGA GGGCTCTTGA GGCTGGAAAC GTAGAGGAGG CAGCCCGTCT ACAAGCAGAA ATTGAGCCAA TTCGCGATAT TCTTCACCTT GGAAGTACTC CTCAGACGCT TAAGCGTTCT CTTGAACTTG CTGGATATTC CGTTGGCCCT GCTCGTTTCC CTGTTACTGA GGTTGCAGAA GGTATTGACG AGAAAATCTA TGTAATGCTT GACCATTACG GAATTGCTCA TAATTAG
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Protein sequence | MSTFKGVIVP MVTPFNRDEE QSINYEAAEQ LLEKLISEGA DGIFTFGSNG EFHVCSPDEK IKFSKFIIEK TAGRLPVYVG TGACSTKEAL YMSREAEAIG ADALSVINPY FLGISDQQLI EYFKTVAASV KIPVLLYNIP KGTGKNISKE VVEQLVTIEN IKGIKDSSGS IDNLKDYLDA AAGHDVDVLV GSDGKISEAH ALGAQGAIAG TANLITKVVV DLWRALEAGN VEEAARLQAE IEPIRDILHL GSTPQTLKRS LELAGYSVGP ARFPVTEVAE GIDEKIYVML DHYGIAHN
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