Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1269 |
Symbol | |
ID | 8414148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1425570 |
End bp | 1426361 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 645022860 |
Product | Methyltransferase type 11 |
Protein accession | YP_003180284 |
Protein GI | 257785067 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCCCG ATTATAAGAA CTGGTTTCCA AAGGGAATGG TATATGGGTT CTTTTCCGGA ACTGCTGTTT GCCTAGCTTT TCTTTTTATA GTGCTGTTTG TTGACTTTAT TCCTATGAAG TCCTTTCAGA CTATGCTTGT TCTAGTTTTT GGTGTCCTCT CTGTGATTAT GATTGTAATA AGTATCTGGG GATTTAAGAT GCACCAGGCC TTCTCATACG ATGGTAAGCG TCAGATGTCT CGACAGATTA TTGAAGGAAT AGCTAGCTAC ATTACTATTC CAGCAGGAGG TAGAGGACTG GATGTTGGAT GCGGCAGCGG AGCTCTTGCC ATCGCTGTTG CAAAGAAAAA TCCAGATGCG ATGGTTGTTG GTATTGATCG TTGGGGCAAA GAGTACGCCT CGTTTAGCAA AACACTTTGC GAGAATAACG CAAAAGCGGA AAGCGTTACA AATACAAGCT TCTTTCCTGG TGATGCTGTG AATTTGAATT TTGAAGACGA ATCTTTTGAT GCTGTTTTTA GCAATTATGT TTATCACAAC ATCCCTAGCA GCAATCGTCA AGAAATCCTA TTAGAGACAC TGCGCACGCT TAAAAAGGGT GGCGTATTTG CTATTCACGA TATTTTTTCT CAGAATAAAT ATGGAGATAT GCATGCGTTT CTAGTTACGT TAAAGTCTAT GGGCTATGAA AGCGTAGAGC TTATTGATAC TACCGAGGGT ATGTTTATGA CTCCAAAAGA AGCTAATTGG ATGATGCTCT CTGGATCAGC GTTACTTGTG GGAAGAAAAT AG
|
Protein sequence | MKPDYKNWFP KGMVYGFFSG TAVCLAFLFI VLFVDFIPMK SFQTMLVLVF GVLSVIMIVI SIWGFKMHQA FSYDGKRQMS RQIIEGIASY ITIPAGGRGL DVGCGSGALA IAVAKKNPDA MVVGIDRWGK EYASFSKTLC ENNAKAESVT NTSFFPGDAV NLNFEDESFD AVFSNYVYHN IPSSNRQEIL LETLRTLKKG GVFAIHDIFS QNKYGDMHAF LVTLKSMGYE SVELIDTTEG MFMTPKEANW MMLSGSALLV GRK
|
| |