Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1178 |
Symbol | |
ID | 8414052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1317770 |
End bp | 1318975 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 645022768 |
Product | translation elongation factor Tu |
Protein accession | YP_003180197 |
Protein GI | 257784980 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000242479 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000292333 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCCAAGG AAAAGTTTGA CCGCTCTAAG CCACACGTAA ACATCGGTAC GATTGGTCAC GTCGACCACG GTAAGACTAC CCTTACTGCA GCAATCACCA AGGTTCTCTC TGAGACCGAG GGCTGCAAGG CAGACTTTAC CGCCTTCGAG AATATCGATA AGGCTCCAGA GGAGCGTCAG CGTGGTATTA CCATTTCTGT TGCTCACGTT GAGTATGAGA CATGGAAGCG CCACTACGCT CACGTTGACT GCCCAGGTCA CGCAGACTAC ATCAAGAACA TGATTTCTGG TGCAGCTCAG ATGGACGGTG CAATCCTCGT TATTGCTGCT ACCGATGGTC CTATGGCTCA GACCCGCGAG CACATTCTTC TTGCACGTCA GGTTGGCGTT CCTTACATCA TCGTCTTCCT GAACAAGTGC GATATGGTTG ACGACGAGGA GCTCATTGAC CTCGTTGAGA TGGAGACCCG TGACCTTCTC TCCGAGTACG ACTTCCCAGG TGACGATCTT CCAATCGTCC GTGGTTCCGC TCTCGGCGCT CTTAACGGAG AAGAGAAGTG GATGGATTCC GTCCGCGAGC TCATGCACAC CGTTGATTCT TACATCCCAA CACCTGCTCG TGACAACGAG AAGCCATTCC TGATGGCAAT CGAGGACGTC ATGACCATTT CTGGTCGTGG TACCGTTGCT ACCGGCCGTG TTGAGCGCGG TGAGCTTAAG CTCAATGAGC CTGTTGAGAT TGTTGGTATT AAGCCTACTC AGCAGTCTGT TGCTACTGGC ATTGAGATGT TCCGTAAGAC CATGGACTTC TGCGAGGCTG GCGACAACGT TGGTATTCTT CTTCGTGGTG TTAAGCGTGA GGATATCGAG CGCGGTCAGG TTCTCTGCAA GCCTGGTACA GTTACTCCAC ACAAGAAGTT CACCGGTGAG GTCTACGTTC TTACTAAGGA AGAGGGCGGC CGTCACACCC CATTCTTCTC TGGTTACCGT CCACAGTTCT ACTTCCGTAC AACTGACGTA ACTGGCGACA TCTACGAGCT CACCGATGCA AATGGTGGCA AGGTAGAGAT GGCTATGCCT GGTGACCACA TCACCGTTGG CTGCGAGCTT ATTCACCCAA TCGCTCTTGA GCAGGGTCTG AAGTTCGCTA TCCGCGAGGG TGGCCACACC GTCGGCGATG GTCGTGTTTC CACCATCATT GAGTAA
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Protein sequence | MAKEKFDRSK PHVNIGTIGH VDHGKTTLTA AITKVLSETE GCKADFTAFE NIDKAPEERQ RGITISVAHV EYETWKRHYA HVDCPGHADY IKNMISGAAQ MDGAILVIAA TDGPMAQTRE HILLARQVGV PYIIVFLNKC DMVDDEELID LVEMETRDLL SEYDFPGDDL PIVRGSALGA LNGEEKWMDS VRELMHTVDS YIPTPARDNE KPFLMAIEDV MTISGRGTVA TGRVERGELK LNEPVEIVGI KPTQQSVATG IEMFRKTMDF CEAGDNVGIL LRGVKREDIE RGQVLCKPGT VTPHKKFTGE VYVLTKEEGG RHTPFFSGYR PQFYFRTTDV TGDIYELTDA NGGKVEMAMP GDHITVGCEL IHPIALEQGL KFAIREGGHT VGDGRVSTII E
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