| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1149 |
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| Symbol | |
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| ID | 8414022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1292429 |
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| End bp | 1292989 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022738 |
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| Product | ribosomal protein L5 |
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| Protein accession | YP_003180168 |
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| Protein GI | 257784951 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000871662 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000556767 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAGACG AGAAGTACAC ACCTCGCCTT AAAGAGCTTT ATTACGCATC TGTGCGTGAT
GCTCTGAAGG AGAAATTTGG TTACACCAAC GTAAACCAGA TTCCTAAGTT TGAGAAGATT
GTTGTCAACA TGGGTGTTGG CGAGGCAGCT ACAGACGCTA AGGCAATTGA CGGCGCTGTA
AACGACCTGC GCACCATTAC TGGTCAGCAG CCACTTGTTA CACATGCTCG TAAGTCTATC
GCAACTTTTA AGCTTCGCCA GGGTATGCCA ATTGGCGCTA AAGTTACCCT TCGTGGCGAT
CGTATGTGGG AGTTCCTGGA TCGTCTGATC GCAGTTGCAA TTCCTCGTAT TCGCGACTTC
CGTGGTATCT CTACTAAGAG CTTCGACGGC CGTGGTAACT TCTCCATGGG CGTAACTGAG
CAGCTCATCT TCCCAGAGAT TGACTTTGAC AAGGTGGACC ACACTCGTGG TATGGACATC
ACCATTGTCA CTACTGCTAA CACCAATGAG GAAGGCAAGG CACTTCTTGA AGCTTTCCAC
TTCCCATTCA AACAGGACTA A
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| Protein sequence | MADEKYTPRL KELYYASVRD ALKEKFGYTN VNQIPKFEKI VVNMGVGEAA TDAKAIDGAV
NDLRTITGQQ PLVTHARKSI ATFKLRQGMP IGAKVTLRGD RMWEFLDRLI AVAIPRIRDF
RGISTKSFDG RGNFSMGVTE QLIFPEIDFD KVDHTRGMDI TIVTTANTNE EGKALLEAFH
FPFKQD
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