| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1102 |
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| Symbol | |
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| ID | 8413975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1245269 |
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| End bp | 1246126 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022691 |
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| Product | degV family protein |
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| Protein accession | YP_003180121 |
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| Protein GI | 257784904 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACTA AGCGAATTGC TATCATCACA GACTCAGGAA CTAACGTCCC ACCTGATTTT
GTTGCTGAGC ACAATATTCG TATCACCCCA CTTCGCATTA ATTATTCTGA CGGCTCTTCT
TATGAGTCTG GCGTTACCAT CACACCAGCA GAGCTTGTTG CTCGCTTTAA AGAAGAGGTT
CCAAAGACTT CACTTCCTTC TCCAGAAGGT ATTAAAGCGG CCTTTGATAC TGCTAAAACA
GAGGGGTACG AGGGTGCCAT TTACATTGCA ATCTCCTCTG GACTTTCCGC TACCTGCGAT
ACTGCTCGTA TGATTGCAGA ATCCATTACA GACTTCCCTA TTTATGTTGT TGATACCAAA
AACATTGGTA TTGCTTCCGG CCTTATTGTT ATTGAAGCTC AGCGCCTCAT TGATCAAGGT
CTTTCTCTTG AAGAGATTGG CCCCAAACTT GATCGAGATT CTCTTAACAC ACGCGTATAC
TTCTCCGTTC CAAGCCTTGA GTATCTACGT AAAGGTGGCC GCATTTCTGA AGCAATCTAT
CGTATTGGTT CCATGTTGAA TATAAAGCCA GTTCTTACCT GCGATGAGAA CGGTAAGTAC
ACCATTGCAA AGAAGACTCG TGGTTGGCAA AAGTCTCTTG CAGGGCAGAT TGCTTTAGGA
TCAGCTTTTG CTCAGCAATT TGACCACGTT CATGTGGGAA TTTGCTGCTC TGCTCCTAAT
ATCATTTACT CCGAAATGGA AGCCATGATT AAAGAGGCTA TTCCTAATGT CACCGACTTT
AGATATGTCG AGGCTGGCTC GGACCTTGTT GTCCATACTG GACCAGGTCT TGTTGGCTAT
GCCGTATTTG GCTACTAA
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| Protein sequence | MDTKRIAIIT DSGTNVPPDF VAEHNIRITP LRINYSDGSS YESGVTITPA ELVARFKEEV
PKTSLPSPEG IKAAFDTAKT EGYEGAIYIA ISSGLSATCD TARMIAESIT DFPIYVVDTK
NIGIASGLIV IEAQRLIDQG LSLEEIGPKL DRDSLNTRVY FSVPSLEYLR KGGRISEAIY
RIGSMLNIKP VLTCDENGKY TIAKKTRGWQ KSLAGQIALG SAFAQQFDHV HVGICCSAPN
IIYSEMEAMI KEAIPNVTDF RYVEAGSDLV VHTGPGLVGY AVFGY
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