| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1091 |
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| Symbol | |
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| ID | 8413964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1234323 |
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| End bp | 1235492 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022680 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_003180110 |
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| Protein GI | 257784893 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAG AGGGTACACA TACTGCTCAT ACTGCCTATT CGCTTCCTCA GGCACTAACG
CGTCTTCAAG ATCAGCCTCA GGTTCAAAAC TTGCTTGCAC GAGCATTGCA TGAACACAAA
CTTGGTCATG CCTATTTGTT TGTAGGTGCT CCTGGTTCTG GTAAAGGTCT TGCGGCCAAA
GCTTTAGCGC AGTGTGTTCT TTGTGCCCAA GGCGGTGACG CTGCTTGTGA CGACTGCATT
CGTATTTCTC GTGGCACTCA TCCTGACGTG CACGTGCTTA CTCCAGCCTC TGCAAACGGT
TATCTTATTG AGCAAATTCG TCAGCTCACC GCTGATGTTA GCCTAGCTCC CATGCGATCA
ACTCATAAGA TTTACGTAAT TGATCGTGCT GATTTGCTTC GAGAGAATTC AGCAAATGCG
CTGCTTAAAA CTATCGAGGA GCCACCTGCA GATACTATTT TTATTCTGTC TGCACGTTCT
TCTTCTGCGG TACTTCCCAC TATTGTTTCT CGTTGTCAGG TGGTTGCGTT TAGAACGCTT
ACTGACGCTG TAGCTAAAGC CGCTATTATG CGAGAGATTT CTGCTACAGA ACAGGAAGCT
CGTATTGCGC TCGCAGCAAC AGGAACCCCT AGTAGAGCTG TGGAGTTTTT GCAGTCGTCT
ACGCGCAAGA ATATTCGCAG ACAACTCATT GACGTTTTTG GCAATCTGCT CAGAAATGAC
TCGTGGGATG TGCTTATATC CGCAAAAGAG CTGATAGAAG CTGCAAAAAT TCCTCTAGGT
GATGTGAAGC GCGCCCAAGA AGAGGCGCTT GCTCAAAGTG AGGATTTTCT TACTAGTGCC
GCTTTGAAGC AGGTTGAGGC CGCAAATAAG CGAGAGCTCA CAGCGCGCGA GCGTTCGGGT
ATCATAGAAA TGTTGGCAAT TCTGGAATCG CTTCTTCGCG ATGTACTTTT ATGTTGTGAA
GCAATCGATG AAGAAATAGT AAATACGGAT GCAGCAGGTA TTATTGACCG TGTTGCGTCT
CAAACTCATA CCCAGGGTGT ACTTGGGGCT CTAGCTGCGG TGCAAGAGGC TCAAAACAAC
CTGGACCGCT CTGTTTCTCC CCAGCTAACC CTTGAGGTTA TGCTGCTGCA TATCAAGGAG
GCACTTACAT GCCCACCGTT GTCCCGGTGA
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| Protein sequence | MTQEGTHTAH TAYSLPQALT RLQDQPQVQN LLARALHEHK LGHAYLFVGA PGSGKGLAAK
ALAQCVLCAQ GGDAACDDCI RISRGTHPDV HVLTPASANG YLIEQIRQLT ADVSLAPMRS
THKIYVIDRA DLLRENSANA LLKTIEEPPA DTIFILSARS SSAVLPTIVS RCQVVAFRTL
TDAVAKAAIM REISATEQEA RIALAATGTP SRAVEFLQSS TRKNIRRQLI DVFGNLLRND
SWDVLISAKE LIEAAKIPLG DVKRAQEEAL AQSEDFLTSA ALKQVEAANK RELTARERSG
IIEMLAILES LLRDVLLCCE AIDEEIVNTD AAGIIDRVAS QTHTQGVLGA LAAVQEAQNN
LDRSVSPQLT LEVMLLHIKE ALTCPPLSR
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