| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1085 |
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| Symbol | |
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| ID | 8413958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1227899 |
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| End bp | 1229509 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022674 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_003180104 |
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| Protein GI | 257784887 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGG CTAAGCCGTC ATACTTTATT ACCACCCCAA TTTATTACGT CAACGCAAAG
CCACACCTGG GAACTGCGTA CTGCACCCTG CTTTGCGATA TCCAGGCTCG CTTTAGGCGT
GCCGCTGGTT ACGATGTTTT TTTCCTTACT GGTATGGACG AGCATGGCGA GAAGGTCGCT
CTTGCTGCAG CTGATCACGG CTTGTCTCCA CAGGCATGGT GTGATTCCCA GGTTCCTTTT
TTCAAGGGAC TTTATGAAGA GCTCAACATT TCATATGATG ACTTTATCCG TACTACCGAT
GAGCGCCATG TAAAGGCTGT CCAGTATCTG TGGGAGCGCA TGCGTGAGGC TGGCTTCATC
TATAAGGGAT CCTATGATGG CTGGTACTGC ATACATGAGG AGACTTTTTT CACCGAGACC
CAGGTAGAAA AGGCAGACGA AGAGGCTGGT TGCAAGGGTG CACACCTTTG CCCAGATTGT
CATCGTGAGC TTGAGCGCGT CTCAGAAGAG TCTTGGTTCT TCAAGCTTTC TGCATTCCAG
GACAAGTTGC TTGAGCTGTA TGCTGAGCAC CCAGATTTCA TTGAGCCAGA CTTCCGTGCA
AACGAGGTCC GTAGCTTTGT TGAGTCTGGT CTTCAGGATA TTTCTGTATC TCGTACCAGC
TTTGACTGGG GTATTCCAGT TCCTTTTGAT GAGTCTCACG TAACCTACGT CTGGTTTGAT
GCTCTTCTCA ACTATTACAC CGCTGTTGGC TACGGTGATG ATAGTCCAGA GGCTGCTGCT
ATGAGAAAGC GTTTCTGGCC AGCTCAGATG CACGTTGTTG GCAAAGACAT CATTCGTTTT
CACTGCGTCA TTTGGCCTGC AATGCTTATG GCCCTTGGCG AGGCTGTTCC TGAGCACATC
TTTGCTCACG GCTTCTTGAA CGTTCGTAAT TCTGAGACCG GCGTTGTTGA GAAGATGAGC
AAGTCTCGCG GAAACGCCAT TGCACCTAAG GATGTTTTGG ATTTGCTTGG CGTTGAGGGC
TATCGCTATT ACTTCATGAC CGATGTCACC CCTGGCGAGG ACTCTGGCAT TTCCTTTGAG
CGCATGGAGC AGGTCTATAA CGCTGACCTG GCAAATAGCT GGGGTAATTT GGTTTCTCGC
GCCCTTAATA TGAGCGATAA GTACTTTGAG GGTGTCACTC CAACCTTTGA TGGTTCTTCT
GTTGCTGCAG ACCATCCGCT GCGCAAGCTG GCTGAGGGCA TCTATGATCG CTATGCCACT
TGCATGGAGA AGATGGACTA CGTAGGCGCC AAGAACATCA TTATGGAGCT TGTCCACGCA
GCTAACCACT ACATTGAGGA TGCCGCTCCT TGGACAGTGG CAAAAGACCC CGAGCGCGCA
GCAGAACTTG CAGAGATTAT CTATACACTG CTTGAGTCTA TCCGCATTTG TGCACACCTG
TTTATGCCAT TCATGCCTAC CACATCTACA GAGGTTTTGC GCCGTATGAG CCTTGATGAG
GTAGAGATTA ACTCTACCGA TGCCCGTAGC GAGTGCACAT GGGGCAGGCT TCAGGGTGGC
TTGGCCGTTT CTAAGGGAGA CGCTCTGTTC CCACGTCTTG CAAGCAAGTA A
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| Protein sequence | MPEAKPSYFI TTPIYYVNAK PHLGTAYCTL LCDIQARFRR AAGYDVFFLT GMDEHGEKVA
LAAADHGLSP QAWCDSQVPF FKGLYEELNI SYDDFIRTTD ERHVKAVQYL WERMREAGFI
YKGSYDGWYC IHEETFFTET QVEKADEEAG CKGAHLCPDC HRELERVSEE SWFFKLSAFQ
DKLLELYAEH PDFIEPDFRA NEVRSFVESG LQDISVSRTS FDWGIPVPFD ESHVTYVWFD
ALLNYYTAVG YGDDSPEAAA MRKRFWPAQM HVVGKDIIRF HCVIWPAMLM ALGEAVPEHI
FAHGFLNVRN SETGVVEKMS KSRGNAIAPK DVLDLLGVEG YRYYFMTDVT PGEDSGISFE
RMEQVYNADL ANSWGNLVSR ALNMSDKYFE GVTPTFDGSS VAADHPLRKL AEGIYDRYAT
CMEKMDYVGA KNIIMELVHA ANHYIEDAAP WTVAKDPERA AELAEIIYTL LESIRICAHL
FMPFMPTTST EVLRRMSLDE VEINSTDARS ECTWGRLQGG LAVSKGDALF PRLASK
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