| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0970 |
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| Symbol | |
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| ID | 8413841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1094151 |
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| End bp | 1095323 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 645022558 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_003179990 |
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| Protein GI | 257784773 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000558459 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAT CACAGGTAAC CATTACCTCC TCTGAACGCG AAGCCGCTAT TGTACGTACC
AGTGCTATTG GCATTGCGGC CAATGTTGCA CTTGCGGCAT TCAAAGCTGC AGTGGGTATT
CTTTCCAACT CAATTGCTGT CACTCTTGAT GCAGTTAACA ATCTTTCTGA TGCAATCTCA
TCAATCATTA CAATTGTCGG AACCAAACTC TCTAACAAAA AAGCTGATCG CGAACACCCT
TTTGGTCACG GGCGCATTGA ATACATCACT ACAACGGTAA TTGCTGCAAT CATTATGTAT
GCAGGTATTT CTTCACTTAT TAAATCTATC CAGGACATTA TGAATCCTGC AACACCAGAC
TATAGTCCCC TGTCTTTAGT CATCATTGCT GTAGCTGTAC TGGTAAAGAT TGTTTTGGGT
CACTATGTTC GTACTATTGG TAATCGCGTA AACTCCGACA CACTTGTTGC TTCAGGTTCT
GACGCGCTAT TTGATGCCAT GCTTTCTACT TCTGTTCTAG CGGCTGCTCT TATCTTTATC
TTTACGGGAA TTAGCCTTGA AGCATACGTA GGAGTTGTTA TCTCTGCATT CATCATCAAG
GCTTCAATTG AACTGTTACA CGATTCTATT AAAGAGATTA TTGGAATGCG TCCTGACGCA
GCTCTTTCAA CACTCATCTA TGACATTGTA AAAGATGACC CAGATGCAGA GGGTGTCTAC
GACCTTATCA TCCATAGTTA TGGTCCAGAT AAATTTGTTG GATCATTCCA TACTGAGGTT
CTTGATACCA CTTCAGCTAT TGAGATTGAT ACGATGATCC GACGTCTGAG TACAGAAATA
TACAACCAAA CATCAGGCAA AATCATCATT GCTGCTATTG GTATTTATGC GAAAAACACC
ACTGATAATC GCATTATAAA GATGCGTACT AAAGTTACTG AAATGGCTTT AGCTCATGAA
GGAGTTCTTC AAATTCATGG CTTTATTGCT GACATTGAAA ACCAATTTAT GGCCTTTGAT
GCTGTTATTG AGTTTGGCTA TGATGGCAAG CAAATTATTC ACGATATTAT TCATGAAGTA
GAAGAGGTCT ACCCTGACAT GAATGTCTCG ATTCTTTTAG ATCGCGATAC AAGTGATTTA
TCCGAGCAAG AGGATGCTGG AGACTTAGCC TAA
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| Protein sequence | MTQSQVTITS SEREAAIVRT SAIGIAANVA LAAFKAAVGI LSNSIAVTLD AVNNLSDAIS
SIITIVGTKL SNKKADREHP FGHGRIEYIT TTVIAAIIMY AGISSLIKSI QDIMNPATPD
YSPLSLVIIA VAVLVKIVLG HYVRTIGNRV NSDTLVASGS DALFDAMLST SVLAAALIFI
FTGISLEAYV GVVISAFIIK ASIELLHDSI KEIIGMRPDA ALSTLIYDIV KDDPDAEGVY
DLIIHSYGPD KFVGSFHTEV LDTTSAIEID TMIRRLSTEI YNQTSGKIII AAIGIYAKNT
TDNRIIKMRT KVTEMALAHE GVLQIHGFIA DIENQFMAFD AVIEFGYDGK QIIHDIIHEV
EEVYPDMNVS ILLDRDTSDL SEQEDAGDLA
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