| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0958 |
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| Symbol | |
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| ID | 8413829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1079118 |
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| End bp | 1080074 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022546 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003179978 |
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| Protein GI | 257784761 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.643704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTGT TTACTAGTGA TAAAAATAGC AAGAAGGTCC AAAAGACTGA AGCTGTTCTT
GAGGATGCCG CCAAAGCTCA AGAAGAAGAG CAGGCCGCCA CTAAGAAGGT CCGTGCACAG
AGTTATTGGC AGGTTAGCTG GAACATTTTT AAGAAAAACA AGCTTGGTAT GATTTGCTTG
GGTATTGTTT TGGTTTTGGC AATTATTGCG ATTCTTGCTC CTGTTATTGC TCCTTATAGC
TACAAAGATC AAAACCTGGC AATTCAGAAC CAGAATCCAA CTTTTGCACA TTTGCTTGGT
ACAGATGAGT ACGGTCGAGA TATTCTCTCT CGTATTATTT ATGGCTGCCA GATTTCTCTG
TCTGTCGGTA TCATTTCGCA GGTCATTGCT CTCTTTATTG GCTTTGTCGC AGGCGTAGCA
GCAGGATATT ATGGTCGCTG GGTTGATTCG GTTGTTTCCT TTATCATCCA GGTTTTCTCC
AGCTTCCCAT TTTTACTTTT TGCAATCTTG ATCATGTTTG TTATGGGTCC AGGTCTTATT
AATCTCTACA TTGCACTGGG TCTTTTGATG TGGACAACTA CAGCAAGGCT GATTCGAGGC
GATGTTATGC GTCTAAAGAA TTCTGAATAT ATTCAGTCTT GTATTTTGTC TGGTGGTAAC
AGCTTCCGCA TCATCATGAA GCACCTGCTG CCTAATTGTA TTTCTACGTT GATTGTTGTT
TCTACTTTAG GTATTCCAAG TGCAATTCTT TCTGAGGCAA CACTTTCGTT CTTGGGATTA
GGCGTTCAGC CACCTGAGGC AAGTTGGGGT CAAATGATTG CAGCCTCTCA GCCTTATCTG
GCATCACAAC CTCTCTACAG TATTGCTCCA GGTATTGTCA TCATCATTAC GGTTATGTCT
TTCAACTTAC TTGGTGACGC ACTTCGCGAC GCCCTTGATC CAAAGATGCG TTCTTAG
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| Protein sequence | MALFTSDKNS KKVQKTEAVL EDAAKAQEEE QAATKKVRAQ SYWQVSWNIF KKNKLGMICL
GIVLVLAIIA ILAPVIAPYS YKDQNLAIQN QNPTFAHLLG TDEYGRDILS RIIYGCQISL
SVGIISQVIA LFIGFVAGVA AGYYGRWVDS VVSFIIQVFS SFPFLLFAIL IMFVMGPGLI
NLYIALGLLM WTTTARLIRG DVMRLKNSEY IQSCILSGGN SFRIIMKHLL PNCISTLIVV
STLGIPSAIL SEATLSFLGL GVQPPEASWG QMIAASQPYL ASQPLYSIAP GIVIIITVMS
FNLLGDALRD ALDPKMRS
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