Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0893 |
Symbol | |
ID | 8413759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 998396 |
End bp | 999463 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645022476 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_003179913 |
Protein GI | 257784696 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0248566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.109317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGAAG CAGATGCAGA TAATCTTTTT GAGTCATCGT CTACTCCAGC TCCATTTCCA GGACACACTT CTCAGCGCGT AGTTTCTAGT GGGCTTCAGG CGGAAGATCT TGAACAAGAT AGAAACTTAC GTCCAAAAAC ACTTGATGAG TATCTTGGTC AGGAGCGCGT TAAATCCAAT CTGCGCGTTC TGATTGAAGC GGCAAAAAGT CGTAATGAAC CTCTTGATCA TGTTATTTTT TCTGGTCCTC CAGGCCTTGG TAAAACAACC CTTGCTGGCG TTTTAGCAGG AGAGATGGGT TCAAAGCTTC ATACAACTTC TGGTCCTGCA ATTGAGCGAG CAGGAGATTT AGCGGCAATT CTCACTAATC TTGAAGAAGG AGATATCCTC TTTGTAGATG AGATTCATAG GCTTAATCAT CAGGTTGAAG AAATTCTGTA TCCAGCAATG GAAGATTTTT TCTTAGACAT TGTTATTGGC AAAGGTCCTG CAGCAAGGTC CATTAGACTT GATATCCCGC GCTTCACACT CGTAGCAGCA ACAACAAGAA CAGGACTTCT AACTGGTCCT TTGCGTGATC GTTTTGGTAT CTCATATCGT CTTGATTACT ACACTGTCTC TGAGCTTCAA ACTATTGTTA TGCGCTCAGC AAATATTCTT GATGTTGAAG TAGATGAGCA GGGAGCTGCT GAAATTGCTT CTCGATCAAG AGGTACACCG CGTTTGGCAA ATCGTTTATT AAAACGTGTG CGAGATTACG CACAAGTTAA AGCTGAAGGT ACTATTACCT GGCAGGTAGC CTCAGAGGCA CTTTCATTTT TTGAGATTGA TGAGCTTGGC TTAGATGTAA TGGATGTACG TGTTTTGCGT GCACTTTGCG AGACATTTAG AGGTCGTCCA GTGGGACTAA CAACCATTGC AAGTGCAGTT TCAGAGGATC CTTCTACACT TGAAGATGTT TACGAACCAT ACCTCTTACA ACAAGGGCTT ATTATTAGAA CTCCTCAGGG TAGACAGGCA ACGCATGCTG CATTTGATCA CTTACGTATT CCTGTTCCTG CTAACTAG
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Protein sequence | MWEADADNLF ESSSTPAPFP GHTSQRVVSS GLQAEDLEQD RNLRPKTLDE YLGQERVKSN LRVLIEAAKS RNEPLDHVIF SGPPGLGKTT LAGVLAGEMG SKLHTTSGPA IERAGDLAAI LTNLEEGDIL FVDEIHRLNH QVEEILYPAM EDFFLDIVIG KGPAARSIRL DIPRFTLVAA TTRTGLLTGP LRDRFGISYR LDYYTVSELQ TIVMRSANIL DVEVDEQGAA EIASRSRGTP RLANRLLKRV RDYAQVKAEG TITWQVASEA LSFFEIDELG LDVMDVRVLR ALCETFRGRP VGLTTIASAV SEDPSTLEDV YEPYLLQQGL IIRTPQGRQA THAAFDHLRI PVPAN
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