| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0884 |
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| Symbol | |
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| ID | 8413750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 984399 |
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| End bp | 986300 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645022467 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179904 |
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| Protein GI | 257784687 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.827393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.037395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAAG AAGTAACTTC AACCGAAGAA CTCGAAGACA TGGTTGAATC AACCGAAGCA
GATACTGCTT TGATCCCCTC AACATTGACC GGTATTGTTG ACGTAAATAA TTTTTCTTTT
AAAGAAATTG CTACTGTTCT TTCAAAGAGC ATTGGTGAGT TTAAGAAAGA CACTATCCTC
ACACCAGTCT TTGTTATGGC AGAGACCATC TTAGAGGTCC TTATTCCCTT TAGAACGGCA
GCTCTCGTTG ATACTCTTCG AGCTGGTGCA GATCTCAACG CCATTCTCCA GTCGGGACTC
ATTCTTACCG CTATGGCAAT GTTGTCGCTG CTATTTGGAA CGCTTTCTGG CATCTCTGTT
GCTAAGGCAT CTACTGGATT TGCGCGCAAC CTTCGCCGTG ATATGTTCCG TAACATTCAA
AAGTTCTCGT TTACCACTAT TGACGCATTC TCTTCATCAT CTTTAGTAAC ACGTCTTACT
ACGGATATCT CTAACGTACA GATGGCATTT ATGATGCTCA TTCGCATGGC TGTACGTGCA
CCCTTTATGT TTATTTCAGC CTTTATCGCA GGATTTATAA TGGGTGGTTG GCTTGCAATT
ATTTTTGTTG CAGTCATGCC TCTTTTGGGA ATTGGTCTTT ACCTCATTAT TTCTAGGGTC
ATTCCTATCT TTAAGAAAGT CTTTAAAAAG TACGATGCGC TCAACGAATC CGCTGAAGAA
AACCTTGCTG GCATCCGCGT TGTTAAGTCG TTTGTAAATG AAAATTTTGA ACGTCAAAAA
TTTAATAAAG CTTCAGAAGA ATTACGCGAA GACTTTACTT CAGCAGAAAG ACTTATAGCT
CTAAACTCCC CTTTTATGAA CTTCACCATT TACGTACTGT TTGTTTTTAT TCTTTACTTT
GGCCCTTACC TTATTGTCTC TTCTCAGGGA ACTGCCTTTA GTGTTGGCCA GCTTTCTTCC
CTTATTACCT ATGGCTTTAT GATGCTTATG GCACTTATGA TGCTTTCCTT TGTCTTTGCC
ATGATTATCA TCGCAGAGGA AGGTGCTCGC CGTATCTGTG AGGTACTACT TGCAACTTCT
ACCATTAACA ACCCAGAAAA TCCTATAACC AAGGTTACTG ACGGCTCCAT TGATTTTAAG
AACGTTGGAT TCTCTTATTC TGGACCAGGG GGTCGAGAAG CCCTGTCTGA CGTTAACCTT
CACATTAACT CTGGTGAGGT CATTGGCATC ATCGGTGGTA CTGGCTCTGC TAAGTCCACA
TTGGTACAAC TTATTCCTCG TCTATACGAC GTAACTGCTG GCAGTGTTTC TGTTGGTGGA
CATGATGTCA GAGACTATGA CATTGATACC CTTCGTAGCG CTGTTGCTAT GGTTCTTCAA
AAGAACGTGC TCTTTAGTGG CACCATTAAA GAAAATCTTC TCTGGGGTAA TCCTAACGCT
ACCGATGAAG AAATTCTTGA AGCGGCCCGT CTTGCTCAAG CAGATAGCTT TGTTCAAACC
TTTCCTGATA AATATGAGAC TCATATTGAG CAGGGTGGCA ACAATGTTTC TGGTGGTCAA
AAACAGCGTC TCTGCATTGC ACGCGCACTT CTTAAACGTC CAAAAGTACT TATTCTTGAT
GACTCTACCA GCGCTGTCGA TACAAAGACT GATTCTTTAA TTCGCACTGG CCTCAAAGAT
TATCTGCCTG ATACCACCAA GATTATCATT GCTCAACGTA CATCCAGTAT TGAAGAGTCT
GACAAGATTA TTGTTCTGGA TAACGGCCGC ATTAACGCTA TTGGTACGCA TGAAGAGCTC
TTGAAAGATA ACCCAATCTA TCGCGAAGTA TACTTCTCGC AGAACAAACA AAGTGTTGAT
GAAAACCAGT CCCAGGAAGG CGAGGTGACT TCTCATGAGT AA
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| Protein sequence | MPEEVTSTEE LEDMVESTEA DTALIPSTLT GIVDVNNFSF KEIATVLSKS IGEFKKDTIL
TPVFVMAETI LEVLIPFRTA ALVDTLRAGA DLNAILQSGL ILTAMAMLSL LFGTLSGISV
AKASTGFARN LRRDMFRNIQ KFSFTTIDAF SSSSLVTRLT TDISNVQMAF MMLIRMAVRA
PFMFISAFIA GFIMGGWLAI IFVAVMPLLG IGLYLIISRV IPIFKKVFKK YDALNESAEE
NLAGIRVVKS FVNENFERQK FNKASEELRE DFTSAERLIA LNSPFMNFTI YVLFVFILYF
GPYLIVSSQG TAFSVGQLSS LITYGFMMLM ALMMLSFVFA MIIIAEEGAR RICEVLLATS
TINNPENPIT KVTDGSIDFK NVGFSYSGPG GREALSDVNL HINSGEVIGI IGGTGSAKST
LVQLIPRLYD VTAGSVSVGG HDVRDYDIDT LRSAVAMVLQ KNVLFSGTIK ENLLWGNPNA
TDEEILEAAR LAQADSFVQT FPDKYETHIE QGGNNVSGGQ KQRLCIARAL LKRPKVLILD
DSTSAVDTKT DSLIRTGLKD YLPDTTKIII AQRTSSIEES DKIIVLDNGR INAIGTHEEL
LKDNPIYREV YFSQNKQSVD ENQSQEGEVT SHE
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