Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0865 |
Symbol | |
ID | 8413731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 960291 |
End bp | 960476 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 645022448 |
Product | regulatory protein, FmdB family |
Protein accession | YP_003179885 |
Protein GI | 257784668 |
COG category | [S] Function unknown |
COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000475517 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.391737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGTT ATAGCTATCA CTGCACACAC TGCGACAATA CCTTTGAAAT TGAACGTCCA ATGAATCTGA AAATTGAAGC TCCTCAGTGC CCAAAATGTG GACATGAGAC TGAGCGCGTG TACAACACCT CAACTATTGT CTTCAAAGGT AGCGGTTTCT ATAACACCGA CAGCAAAGGA AAATAA
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Protein sequence | MARYSYHCTH CDNTFEIERP MNLKIEAPQC PKCGHETERV YNTSTIVFKG SGFYNTDSKG K
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