Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0831 |
Symbol | |
ID | 8413697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 918794 |
End bp | 920035 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645022414 |
Product | NusA antitermination factor |
Protein accession | YP_003179851 |
Protein GI | 257784634 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000351407 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000535814 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCATCTG AAATGATGGA AGCTTTGATG TTGCTTTGCC AGGAAAAGCA CATCGATGAG TTGTATTTAC TGGATCGTTT GGAGCAGTCT CTGGCAAAAA GCTATGCTGA TGTCCTCCAC CTTGATTTTG GTGCTCGCGT CACTATTGAT AGGGCTACAG GCCGTGTATA CGTTTATGAG CTTGTTCCTA AGGGCGAGCC AGATGAGGAG ACTGGTGAGT ACACCGAGTT TGATGAGGTA GATGTAACTC CTCCTGATAC GAGCCGTATT GCTGCTCAGC ATGCTAAGGC AGAGATTAAG ACGCTTGTTC GTAATGCTGC TCGTGCTCAG ATTTATGATG AGTTCCGTGG TCGCGTTGGT GACATCATTA CTGGTACCGT TCTCCAGTCC ACTCCTGATT TCACCATCAT TAAGATTCGT GAGGGTGTAG AGGCAGAGCT TCCACACTTT GACCAGCGTC GTTTCCCTGA CGAGCGTGAT GAGCGTCCAG CAGGAGAGCG TTATCTACAC AATCAGCGCA TCAAGGCAAT TATTGTTGAC GTTCGTGATC CTAATGCAAC TCAGCCAGCA GTTCGTGGTG AGCGCCAGCG TCCACCAATT GTTGTCTCTC GTACCCACCC AGATCTTATC CGTCGTCTCT TTGAGCTTGA GGTCCCAGAG GTTTATGACG GTGTAGTGAG CATTCGTTCT ATTGCTCGTG AGGCTGGCGT TCGTTCTAAG ATTGCTGTTT CTTCCGTTGA TGAGCGTCTT GATCCTGTTG GTGCTTGTGT TGGTCCTAAG GGCAGCCGTG TTCGTACCGT AGTTTCTGAG CTCCGCGGGG AGCGCGTTGA CGTTGTACCT TGGTTTGATG ACGCTGCTCG TTGTGTTGCC TCCGCACTTT CACCTGCACG TGTTTCTCGC GTTATTGTTG ATGGCGCAAC TGGTCACGCA ACCGTTATTG TTCCTGATGA TCAGCTATCT TTGGCTATTG GTAAAGAGGG TCAGAATGCT CGTCTTGCTG CTCGTTTGAC TGGTCTTCAC ATTGACATCA AGAATGAGTC CCTTGCTGCA AACATTTTGA ACAACCTTCC TGAGGTTGTT GAAGAGGCTG TTGACGAGGA AGAGATTGCT CATCGTTGCA AGTATGTGAG CCCTAGCGGA GTTCCTTGCC GCAATATGGC AAGACCTGGT TCTGATTTCT GCGGCATTCA TGATGCCATG GAGAATGCAG AGATTTCTTC TGATTCAGAC TCATTGATTT AG
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Protein sequence | MASEMMEALM LLCQEKHIDE LYLLDRLEQS LAKSYADVLH LDFGARVTID RATGRVYVYE LVPKGEPDEE TGEYTEFDEV DVTPPDTSRI AAQHAKAEIK TLVRNAARAQ IYDEFRGRVG DIITGTVLQS TPDFTIIKIR EGVEAELPHF DQRRFPDERD ERPAGERYLH NQRIKAIIVD VRDPNATQPA VRGERQRPPI VVSRTHPDLI RRLFELEVPE VYDGVVSIRS IAREAGVRSK IAVSSVDERL DPVGACVGPK GSRVRTVVSE LRGERVDVVP WFDDAARCVA SALSPARVSR VIVDGATGHA TVIVPDDQLS LAIGKEGQNA RLAARLTGLH IDIKNESLAA NILNNLPEVV EEAVDEEEIA HRCKYVSPSG VPCRNMARPG SDFCGIHDAM ENAEISSDSD SLI
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