| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0756 |
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| Symbol | |
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| ID | 8413621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 837579 |
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| End bp | 838775 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645022338 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_003179776 |
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| Protein GI | 257784559 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins)
[COG3883] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.640011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGC GCCGATCTTT CACAAGACGA GACGCTCTCT TATTTGCAGG TCTTGGTGTA
GCTGCTACGC TGCTTACTCC AGCTAGGCTA TTCGCAGACC CACAAAGCGA TCTTGAGGCC
GCATCTGCCC AGTTAGACTC ACTTGGTGCA GCTCTTGCAG AAGCCATGGA TAACCTTAAC
GAGAAAACCT ATGCACTTGA CGCTACCAAC AACAAGATTG GTGAAGTTCA AGAGCAGATT
GCAGAAACCA CAAACCAGCT CAATCAGCAG CGCCTGGTCC TTTCTGCAGC AATGAGGAGT
GCTTATAAAG CAGGCCCACA GGAAACTTTG GACTTCCTCC TTGGAGCATC AAGCCCAGAG
GACTTTGTCA GCCGTGTCTA TTATATGGAC CGCACTAGCA AGCAAGAGGC TGACTCCATT
AATACGGTTA AGACTCTTGG CGATCAACTT CAGGCTCAGC AGCTTGAGCT TCAAGCCGAG
CAAGAGAATC TCCAAGCTCA GGTCGCAGAA ATGAAAACAA CCGCAGATGG TCTTCAAAGC
CAAGTTGCGG AAGCTAAGGC TTACTATGAC TCTCTTGATG CAGAGGTAAA AGCACAGCTT
GCCGCTCAAG AGGCTGCATC AGCAAATAAC AACGTTGCTT ATGCAATTGA GACTGTTACT
CGTGAGAACC CCTCTAACAG CTCTGAGTCC AACGATAGCC CCTCTAACAG TTCAAATTCA
AACTCCAGCT CTTCGAGCTC TAGCAACTCC AGTAGCAGTT CTAACTCTGG TAGTGGCTCT
AACTCTAGTA GTGGGTCTGG TTCAGGCAGC GGATCACACT CCAGCGGTGG TGGCGGTGGT
TATCCAGCCG CAGGCGGCGG CGTTGCCACT GCTTATGCTT GCATTGGCTA TCCATACGTT
TGGGGTGGAG CTTCTCCTGC TTCTGGCTTT GACTGCGGTG GTCTGGTCTA TTACTGCTTC
CTTGGTTATC GCAAAGGTAC TGCAGGAACC ATTGGACGCG CCATTCGTGC TGCTGGTAAC
TGGCACGATT CCATGGATGA GCTCAATTAT GGTGACATCA TCTTTACCCG TGCAGGCTAC
GAGCATGTTG GAATCTATAT CGGCGGTGGT CGCATGATTC ATGCAGCCAA CGAGTCTGTC
GGCGTCATCG AGGGTCCTGT TTACGCTTGC TATGGTGGAG GACCATTCTC TGGCTAA
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| Protein sequence | MSQRRSFTRR DALLFAGLGV AATLLTPARL FADPQSDLEA ASAQLDSLGA ALAEAMDNLN
EKTYALDATN NKIGEVQEQI AETTNQLNQQ RLVLSAAMRS AYKAGPQETL DFLLGASSPE
DFVSRVYYMD RTSKQEADSI NTVKTLGDQL QAQQLELQAE QENLQAQVAE MKTTADGLQS
QVAEAKAYYD SLDAEVKAQL AAQEAASANN NVAYAIETVT RENPSNSSES NDSPSNSSNS
NSSSSSSSNS SSSSNSGSGS NSSSGSGSGS GSHSSGGGGG YPAAGGGVAT AYACIGYPYV
WGGASPASGF DCGGLVYYCF LGYRKGTAGT IGRAIRAAGN WHDSMDELNY GDIIFTRAGY
EHVGIYIGGG RMIHAANESV GVIEGPVYAC YGGGPFSG
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