Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0699 |
Symbol | |
ID | 8413560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 777717 |
End bp | 778490 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 645022277 |
Product | Ribonuclease H |
Protein accession | YP_003179719 |
Protein GI | 257784502 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000499736 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000400312 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGATT CTGCTAAAGA TATAATTGCT CGTTTAAGTG ACGCACCAGA AGCTGAAGCA TACGAACTCA TAGCTCGTTA TAGTGAAGAT CCTCGTAAAC AGGTTATTAA GGCTTTGGAA TCAGCTAAAA AGCGCATTGA AAAAGAACAT GTTGAGAAAA TCCGTGTAGA AGAAATGTAT CGCTTTCAGA AAGAATTTTC TGGGGGTGGA CTTGTTGTTG GCGTAGATGA GGTTGGCAGA GGCTCTGTAG CTGGACCTCT AACGGTCTGT GCTGTATGTT TACCAGATGA ACCTATCATC TATGGTCTTA ATGATTCCAA GAAACTCACT GCAACAAAGC GAGAGATTCT TGCTGAACAA ATTCAAGAAG TAGCTACAGC CATTGGCATT GCTCACATTT CGCCTCAAAG AATTGATGAA GTTGGTATGG CGCAGTGCCT AAGAGACGCT ATGCTGCAAG CTGTTAAAAA CACAGGTATT GAACCTGACT GCGTGTTGAT TGATGGAAAT CCTATGCACA TTCATCCCAA AGAGAAGACT CTTGTCAAAG GTGATGCTCG CATTGCGTCT ATTGCTGCCG CTTCAATTGT GGCAAAAGTA ACGAGAGATG CTCTTATGGT AGCCTATGAT GAGGAATATC CAGGCTATTA TCTGGCAGAA TGTAAAGGAT ATGCCTCTGC TGAACACATT AAGGCTATTG GCGAGAAGGG ACTTTCTCCT ATACATCGTG CATCGTTTTG TGGAAACTTT GTTAAGACGC AGAGACTGTT TTAA
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Protein sequence | MADSAKDIIA RLSDAPEAEA YELIARYSED PRKQVIKALE SAKKRIEKEH VEKIRVEEMY RFQKEFSGGG LVVGVDEVGR GSVAGPLTVC AVCLPDEPII YGLNDSKKLT ATKREILAEQ IQEVATAIGI AHISPQRIDE VGMAQCLRDA MLQAVKNTGI EPDCVLIDGN PMHIHPKEKT LVKGDARIAS IAAASIVAKV TRDALMVAYD EEYPGYYLAE CKGYASAEHI KAIGEKGLSP IHRASFCGNF VKTQRLF
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