| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0676 |
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| Symbol | |
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| ID | 8413537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 754774 |
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| End bp | 756639 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022254 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_003179696 |
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| Protein GI | 257784479 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00732227 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.444552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGTTA AACGAGAAAA TCTCTTCCAT CTTATTGAGC CCATGCTTCC GCATGTCGAG
AAACCCTCAA GATATTTGAA TCATGAGTGG GGAGCAGTAG AGGAGCAAGA AGGTCCTTTT
CACGTTTGTA TGGTCTACGC TGACGTGTAT GAGGTTGGCC AGCCTAATCT TGGCATTGCC
ATTTTGTACA ACGCCTTGAA TAAGGCACCT TATATTTCTT GTGAGCGTGC ATATCTGCCT
TGGACTGATA TGGCCGCTCT TATGCGTAAG CGTAATGTGC CTCTGCTTTC TTTGGAGGGT
GCTACGCCAT TAGCATCTTT TGATGTGGTT GGCTTTACTC TTGCGCATGA AATGATTGCT
ACCAATATTA TAGAAACGCT TGATTTAGCA GGTATTCCAA TGCTTGCTGA AGAGCGTGAT
GAGGAGGACC CGTTCATCTT TGGTGGAGGT CCTTCCGTTT GGAACTCAGA ACCTATGGCT
CCTCTTTTTG ATGCAATTCT TTTGGGTGAT GGTGAAGAAG CACTGGTAGA GATGTGCGAA
TGCGTAAGAA CTTCCAAGCT TGATGGGGTT TCTCGCCAAG AGATTTTGCA TAGGTTGTCG
CAGATTCAGG GCGTTTACGT ACCATTGCTT TATCAGATTG TGCACGACGA CACAGCTACA
CGCTGGGGTT ATGCGGTTCC TAAAGAAGGT AGCGGCGCCC CAAGTGTAGT CTATAAACGC
TGTTTGCCAG ATCTTTCGGT GACTGACCCT GTTGCTCAGC GCATTGTTCC GTATACCGAG
ATTGTTCAGG ACAGGTTGGC GCTTGAGATT CAACGTGGTT GTGCTCGTGG ATGTAGGTTT
TGCCAGGCAG GAATGACGTA TCGTCCTGTT CGTGAACGTC CTGCTCAGCA GATTGTGAAA
GCGGGCGAGG AAGGTCTCTT GAAGAGCGGC TATGATGAGG TTTCGCTCAC ATCGCTTTCT
ACAACTGACC ACTCTCAATG TGGCTATATT CTGCGTCGTA TGAATTCTGA CCTACGTAAA
CGTGGCGTGC GTATCTCTAT TCCATCGCAG CGTATGGATG CGTTTGGCGC GGAGATGGCA
GACGCAGTTT CTACCTCTAG ACGTGGTGGA CTGACGTTTG CGCCAGAAGC GGGCTCTCAG
CGTATGCGTG ACGTCATAAA CAAAAATGTT ACTGAGGATG ACCTTGAGTC CGCAGCAAGA
AACGCATTTG AAAACGGATG GCGCCGCATG AAGCTCTACT TTATGATGGG CCTTCCAACT
GAAACTGATC AGGATATTCA AGCTATTCCT GCAGTTGCTA AGCGTATTTT AGATATCGGC
CGAGAAATTG GTGGAAAGGG TGTTACTGTT TCTGCCTCTG TTGCTGTATT TGTTCCCAAG
TCCTATACGC CGTTTCAGTG GGTGGGTCAG ATTTCTCGTG AGGAGGCCCA GCGTAGGCAG
CAGTTATTGC TCTTTTCAAA CCACGATAGA GGACTCAAGA TTGCCTATCA CGATTCTGGG
ACCTCTCTTG TTGAAGGTGC GCTTTCAAAG ATGGGCCGCG ATGGTTTTAA TTTGATTTAT
CAGGCCTGGA AAAATGGTTG CAAATTTGAT GCGTGGACCA GTGAGTTTAA CCTTGACGCT
TGGAATGCAG CAGCAGAAAG TTTGGGTTTC TCGCTATCGG AGATTGCAAC AGAAACCTTT
GATATTCAGG CAAAACTTCC CTGGGATCAC ACATCTCCTG GTGTGTCTAA GGGCTACTTA
CAGCGAGAAT ATCGTCGAGC GATGGACGAG GTCACTACAC CTGACTGCAC ATTTACCTCT
TGTACGGGAT GTGCGGTATG CCAGACTTTA AAGGTCGACA ACGTTTTGAT GGGGGTGCGC
TCATGA
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| Protein sequence | MRVKRENLFH LIEPMLPHVE KPSRYLNHEW GAVEEQEGPF HVCMVYADVY EVGQPNLGIA
ILYNALNKAP YISCERAYLP WTDMAALMRK RNVPLLSLEG ATPLASFDVV GFTLAHEMIA
TNIIETLDLA GIPMLAEERD EEDPFIFGGG PSVWNSEPMA PLFDAILLGD GEEALVEMCE
CVRTSKLDGV SRQEILHRLS QIQGVYVPLL YQIVHDDTAT RWGYAVPKEG SGAPSVVYKR
CLPDLSVTDP VAQRIVPYTE IVQDRLALEI QRGCARGCRF CQAGMTYRPV RERPAQQIVK
AGEEGLLKSG YDEVSLTSLS TTDHSQCGYI LRRMNSDLRK RGVRISIPSQ RMDAFGAEMA
DAVSTSRRGG LTFAPEAGSQ RMRDVINKNV TEDDLESAAR NAFENGWRRM KLYFMMGLPT
ETDQDIQAIP AVAKRILDIG REIGGKGVTV SASVAVFVPK SYTPFQWVGQ ISREEAQRRQ
QLLLFSNHDR GLKIAYHDSG TSLVEGALSK MGRDGFNLIY QAWKNGCKFD AWTSEFNLDA
WNAAAESLGF SLSEIATETF DIQAKLPWDH TSPGVSKGYL QREYRRAMDE VTTPDCTFTS
CTGCAVCQTL KVDNVLMGVR S
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