Gene Apar_0634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0634 
Symbol 
ID8413494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp713063 
End bp713494 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content47% 
IMG OID645022212 
ProductNUDIX hydrolase 
Protein accessionYP_003179655 
Protein GI257784438 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA CAAAAACAAT CAATGTAGCT GCAGCTATAT TCTATAGGGA TAATAAGATC 
CTTGCAGCTT GCAGAGCTGA TAAAGAAAAT ACTGGCTTAT GGGAGTTTCC TGGCGGAAAA
GTTGAGGCAG GAGAAACCTC GGAGCAGGCC CTGCGTCGAG AAATTCAAGA AGAGTTGCAC
TGCACTGTGC AAGCGGCATT CTTTTACGAC ACAGTAACCT ACTCCTACCC CACTTTTGAC
CTGCACATGG ATTGTTATAT CTGCACGTTA AATGAGTCCG AGAGTCCTAT TGTAGATCCA
AAGGTTCACT CAGAGCTTCA CTGGCTTGCT CAGAACGAGC TGCTCGACGT GCAATGGTTG
CCTGCGGACA TTGAGCTAAT CAAGCAACTT GGCACGTTCT GGAACGATAT CTTTGCGTCA
CAGCATCTAT AG
 
Protein sequence
MSETKTINVA AAIFYRDNKI LAACRADKEN TGLWEFPGGK VEAGETSEQA LRREIQEELH 
CTVQAAFFYD TVTYSYPTFD LHMDCYICTL NESESPIVDP KVHSELHWLA QNELLDVQWL
PADIELIKQL GTFWNDIFAS QHL