| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0610 |
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| Symbol | |
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| ID | 8413469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 682139 |
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| End bp | 683470 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645022187 |
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| Product | glutamate dehydrogenase |
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| Protein accession | YP_003179631 |
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| Protein GI | 257784414 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0929396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATT CATCTAAAGT AATCGCGCAG CTCGAAGAGC GTTATGCAGA TCAGCCTGAG
TTTATCCAGG CAGCAAAAGA AGTTCTTACA ACTATTCAGC CTGCACTTGA CGCACACCCA
GAGTTTGAGA AGGCTGCTCT GCTTGAGCGT CTTGTTGAGC CTGAGCGTAC TGTTATGTTC
CGTGTTCCAT GGATTGATGA CGCTGGCAAC GTTCAAGTTA ATCGTGGATA TCGTATTGAG
TTCAACTCTG CAATTGGACC TTACAAGGGT GGGCTTCGTC TCCATCCAAC AGTTAACCTC
TCAATCTTGA AGTTTCTTGG TTTTGAGCAG ATTTTTAAGA ACTCACTAAC TACACTTCCA
ATGGGTGGTG GCAAGGGCGG CTCTGACTTT AACCCAAAGG GCAAGTCCGA CCGCGAGATT
ATGGCGTTCT GCCAGTCATT CATGACCGAG CTTGCTCGCC ACATTGGTCC TAACACCGAT
GTTCCAGCTG GTGACATTGG TACTGGCGCA CGTGAGATTG GCTACATGTT TGGTCAGTAC
AAGCGCCTCC GCAATGAGTG GACTGGCGTC TTGACCGGCA AGGGCCTAAC CTTTGGTGGG
TCTCTTGCTC GCACCGAGGC TACCGGCTAC GGCGCGGTTT ACTTCCTCAC TCATATGCTT
GCCGAGAAGA ACGATTCTCT TGCAGGTAAA ACGGTTTGCA TCTCTGGCTC TGGAAACGTT
GCTACCTACG CTGCTCAGAA GGCGCAGCAA CTGGGAGCAA CCGTAGTAAC TGTTTCTGAC
TCCTCAGGTT ATGTCTATGA CCCAGATGGT ATTGATGTTG AGCTATTGAA AGACGTCAAG
GAGGTCCGTC GCGCACGTAT CATGGAGTAC GCTGATGCAC GTTCTTCCGC AACCTTCTTC
CCAGGTGAGC GTCCTTGGGG CCAGAAGTGT GACATCGCCA TGCCATGCGC AACTCAGAAC
GAGCTTGAGC TCGCTGATGT GCAGAAGCTT GTCGCCAACG GCACTAAGTA CGTTGTTGAG
GGTGCTAACA TGCCTACTAC TCTTGAGGCA ACCAACTACC TTATTGAGAA GGGCGTCTTC
TTCGCACCTG GTAAGGCTGC CAACGCGGGT GGCGTTGCTG TCTCCGGCCT TGAGATGTCT
CAGAACGCCG AACATCTTTC CTGGACGTTT GAGGAGGTAG ACTCCAAGTT GCAAGGAATC
ATGGAGAGCA TCTACACCGC TGCTTCAGAG GCCGCTGCGA CGTATGGACA TCCTGGCAAC
CTAGTCTTTG GTGCAAACAT TGCAGGCTTC CTCAAGGTCG CAAATGCAAT GATGGCTCAG
GGCGTTTGCT AG
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| Protein sequence | MSYSSKVIAQ LEERYADQPE FIQAAKEVLT TIQPALDAHP EFEKAALLER LVEPERTVMF
RVPWIDDAGN VQVNRGYRIE FNSAIGPYKG GLRLHPTVNL SILKFLGFEQ IFKNSLTTLP
MGGGKGGSDF NPKGKSDREI MAFCQSFMTE LARHIGPNTD VPAGDIGTGA REIGYMFGQY
KRLRNEWTGV LTGKGLTFGG SLARTEATGY GAVYFLTHML AEKNDSLAGK TVCISGSGNV
ATYAAQKAQQ LGATVVTVSD SSGYVYDPDG IDVELLKDVK EVRRARIMEY ADARSSATFF
PGERPWGQKC DIAMPCATQN ELELADVQKL VANGTKYVVE GANMPTTLEA TNYLIEKGVF
FAPGKAANAG GVAVSGLEMS QNAEHLSWTF EEVDSKLQGI MESIYTAASE AAATYGHPGN
LVFGANIAGF LKVANAMMAQ GVC
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