| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0608 |
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| Symbol | |
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| ID | 8413465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 677836 |
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| End bp | 679329 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645022183 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_003179629 |
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| Protein GI | 257784412 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0630977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGAG CAAGCGGAGT ACTTATGGCC GTTTCTTCTC TTCCAAATTC ATATGGGATT
GGTACGTTTG GCAAAGAAGC TTACGATTTT ATTGATTTTC TCGTTAGGAC AAAACAAAGG
TATTGGCAAG TTTTACCTCT TACCACTACA AGTTATGGTG ACTCTCCTTA TCAGTCTTTC
TCTGCAGCAG CAGGAAGCCC TTACTATATT GATTTAAAAG ATCTTGAGAG ACTTGGCTAT
TTAAAGTCGG ATGACTTTGA AGATATTTTC TTTGGAACAA GCAAGACTTG TGTTGATTAT
GGAGCACTTT TTGTAAACCA TCGTCGCTTA CTTAATCGTG CGTTTGATAG GTTTATGCAG
GATATACCTA ATGATTTTGA AAAGTTCTGT CGTGATCAGG CGGAGTGGCT TGATCCTTAT
GCGGAGTTCA TGTCATTAAA GGAAGAATTT GGACACAAAG CTTATTGGGA GTGGCCAAAT
CTTTACCAAC AAAGAAATGA AACTACTGCA AAAGAAATTA AGAAACTTCA GAAGTCAGTT
TTGTACCACA AGATGACTCA GTATTTCTTT TTTACTCAAT GGGCAAAGGT TAAGTCTTAC
GCCAATAAAA GGGGAGTGCT CATAATTGGT GATCTTCCCA TTTATGTTTC ACGAGATTCT
GTTGAGATGT GGGCACAGCC AGAACTGTTT AAGATAAATG AAACAGGACG ACCTATTGCA
GTCGCAGGGA CTCCTCCTGA TCACTTTTCT TCTACCGGTC AATATTGGGG AAATCCCATT
TATAACTGGG AGTATATGAA GAAGTCTCAC TATTCATGGT GGGTTTGGCG AGTGAAGACA
AATCTTGAAA TGTTTGATGT ACTTCGAATC GATCATTTTA GAGGCTTTGA GGCGTATTGG
GAAATTCCTT ACGGAGCTAC AGATGCTCGA GAAGGCAAAT GGATGAAAGG TCCAGATTTG
GAGCTGTTTA AGGAGCTAGA AAAGCAGCTT GGGAAGCTTC CGATTATTGC GGAGGATCTG
GGTCTGTTTA CACCAGAGCT TATTGCCATG CGAGAAAAAA CTGGTTTCCC AGGAATGAAA
ATCCTGCAAT ACGGATTTGA CGGAAAGTAT GATTCTAGAG ATCTTCCTCA TAACTACACC
GCAAATACCA TTGCTTACGT GGGAACGCAT GATAATCCAA CTGCTCGCGG TTGGTACGAG
ACGCTGGCTA CCGATAGAGA GCGTGAACAG GCAGATATCT ACCTTCACCG TTCAAAAGAT
GAGCCGATTG GAGAGGCGCT TTCACGTGGA ATTGCAGCTT CTGTGAGCGA TACTTGTATT
CACACCATGC AAGATCTTCT TGGCTTAGAT GATTCGGCAC GTATGAATGT CCCGGCTACG
GTCGGTGGTA ACTGGTGCTG GCGCATGAAG CAGGGGGCAA TTACGCGTCA TACAGAGGAT
TTCTTAAGAA CTATTACTGA GATGTATTTC AGGGTGTATA TAGAGGAGAA GTAA
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| Protein sequence | MGRASGVLMA VSSLPNSYGI GTFGKEAYDF IDFLVRTKQR YWQVLPLTTT SYGDSPYQSF
SAAAGSPYYI DLKDLERLGY LKSDDFEDIF FGTSKTCVDY GALFVNHRRL LNRAFDRFMQ
DIPNDFEKFC RDQAEWLDPY AEFMSLKEEF GHKAYWEWPN LYQQRNETTA KEIKKLQKSV
LYHKMTQYFF FTQWAKVKSY ANKRGVLIIG DLPIYVSRDS VEMWAQPELF KINETGRPIA
VAGTPPDHFS STGQYWGNPI YNWEYMKKSH YSWWVWRVKT NLEMFDVLRI DHFRGFEAYW
EIPYGATDAR EGKWMKGPDL ELFKELEKQL GKLPIIAEDL GLFTPELIAM REKTGFPGMK
ILQYGFDGKY DSRDLPHNYT ANTIAYVGTH DNPTARGWYE TLATDREREQ ADIYLHRSKD
EPIGEALSRG IAASVSDTCI HTMQDLLGLD DSARMNVPAT VGGNWCWRMK QGAITRHTED
FLRTITEMYF RVYIEEK
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