| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0510 |
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| Symbol | |
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| ID | 8413361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 588153 |
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| End bp | 589751 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645022080 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003179532 |
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| Protein GI | 257784315 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2461] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0555672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGG TTCTTGATTT AAGCAAATCC GTTTATGAGA TTTGCACTAA GTTTCCCGTC
ATTAAAGGCC TTATGGCAGA AAACGGCTTT GCCGAGATTA CCGAGCCAGG CCGCCTTCAG
ACCATGGGCC GTTTTATGAC CATTCCTAAA GGCTGTGACC ACAAAGGCGT AGACCTTGAG
GAGCTCAAGG CAATTTTCCG CTCTCACGGC TTTACTATTC TTGGTGATGA GGAGCCTATA
GCTGCAGACA CTCCATCTGA CGAGAAACCC GCAGACACAG AGGCAACTGA CGCACCTATT
GCACAAACCC CTAAGGAGCG CAAAGCTCTT ATCGCCCAGT ATCTTGAGCG CCTCAACGAC
GGTGAGGACA TCGAGGCTGT TCGTGAGGAC TTTGCTCGTA ACTTCAAGGA TGTCTCTGGA
TCTGAGATCT CTACCGCTGA GCAGGAGCTT ATCGCTGGCG GTGTTCCTAT GGAGAAGGTC
TTGAAGCTCT GCGACGTTCA CGCTGCTCTC TTTGAAGGAA AGGTCTCTTG TGCACCAACA
GGCGCTGCTG AAGAGACTCC TGGACATCCT GTTTGGACCA TGCGCCAAGA AAACGACCGC
ATTCTTGCCT TTATTCACGA CCGCGTTGCT CCAGATGTAA GACGTGCTCG CACGCTTAAC
GAGTCTTCCA GCAATGAAGA GTGCGCTGGT GTTGCAGCAA TTCTAAAGGC TGATATGGAC
GCCTTTGACG AGGTCTTTGT TCACTACAAA CGCAAGGAAG AGCTGCTCTT CCCTCACCTG
GAGCGTCACG ATATTACCGG TCCTTCAAAG GTTATGTGGG GCAAAGACGA CGAAGTAAGA
AACGCCGTTA ACGGCGCAGA GGCTCTGCTT GAGACTGCTT ATGGTCAGTA TGATGCTGGT
CTTATGGCAG GCGTTGCTGA CTATCTGGAT GAAGCTATTG AAGGCGCTGA GTCCATGGCT
TCCAAGGAAG AGAACGTCCT TATTCCACTT TCCCTTGAGC ACCTAACTGC CACCCAGTGG
ACCCAAATTG CTGCTGAAGA GAACGAGTTT GGCCACGCAT TTGGCGTCAA TCCACCTTCA
TGGCATGCAG ATCCTCTTGA GCTTGCAAAT GACAAACTCA AAGAAATGGA AGCTGCAGGT
GCTATGGGCG AGAATAACGC TGAGGCAGAA GAGGAAGCAA TTTCTGCTGA TGGAAAGGTT
AAACTCTCTA CCGGTGAGTT CACCATTCCT CAGCTTGAGG CTGTTTTTGC AACCATTCCG
CTTGACATTA CCTTTGTTGA TGCAGACGAT AAAACCCGTT ACTTCAGCCA CGGCGACACC
CGCGCCTTCC CTCGTCCAAA GAGTTGCCTT GGTCGCGACG TCTACGATTG TCATCCACCA
AAGAGCCAAG AAGCTGTTCG CCGTATCCTC ACCGAGTTCA AGAGCGGCAA GCGTGATTGC
TCTGAGTTCT GGTTTGAAGT CAAAGACAAG TTCCTCTATG TCCGTTACTT TGCTGTCCGC
GATGAAAAGG GCAACTACCT GGGCGCTCTT GAGACCACTC AAGACATCGG ACCAATCCGT
GCCCTTGAGG GAGAAAACCG CAGAGGCTCT GACAGTTAA
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| Protein sequence | MAQVLDLSKS VYEICTKFPV IKGLMAENGF AEITEPGRLQ TMGRFMTIPK GCDHKGVDLE
ELKAIFRSHG FTILGDEEPI AADTPSDEKP ADTEATDAPI AQTPKERKAL IAQYLERLND
GEDIEAVRED FARNFKDVSG SEISTAEQEL IAGGVPMEKV LKLCDVHAAL FEGKVSCAPT
GAAEETPGHP VWTMRQENDR ILAFIHDRVA PDVRRARTLN ESSSNEECAG VAAILKADMD
AFDEVFVHYK RKEELLFPHL ERHDITGPSK VMWGKDDEVR NAVNGAEALL ETAYGQYDAG
LMAGVADYLD EAIEGAESMA SKEENVLIPL SLEHLTATQW TQIAAEENEF GHAFGVNPPS
WHADPLELAN DKLKEMEAAG AMGENNAEAE EEAISADGKV KLSTGEFTIP QLEAVFATIP
LDITFVDADD KTRYFSHGDT RAFPRPKSCL GRDVYDCHPP KSQEAVRRIL TEFKSGKRDC
SEFWFEVKDK FLYVRYFAVR DEKGNYLGAL ETTQDIGPIR ALEGENRRGS DS
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