| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0472 |
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| Symbol | |
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| ID | 8413321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 539090 |
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| End bp | 539896 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022040 |
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| Product | hemolysin A |
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| Protein accession | YP_003179494 |
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| Protein GI | 257784277 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1189] Predicted rRNA methylase |
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| TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.517404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTCAAC GCATTTCTCG CCAAAGGCTC GACAAAGAGC TGGTTAGGCA AGGATTTTTC
AAAGACACTC AGGCTGCTTT GCGCTCAATT CTTGCGGGTG ATGTTTCTAC TAAGGATAGA
AAATTAACCT CAGCAGGAGA GCTTGTTCCT GAAGGTTTAT TTCTGCACGT AAAAGGCGCT
ATTCCGTACG TAAGCCGAGG CGGACTTAAG CTGGAGCGAG CCTTTGAAGT TTTTGATATT
ACTGTTCAAC ATAAAAAATG TTTGGATATT GGCTGTTCAA CTGGTGGTTT TACTGATTGT
CTGCTTCAAA ATGGAGCTGC TTCGGTTACC TCAGTTGATG TTGGCTATGC GCAGTTTGAT
TGGTCGCTTA GAAACGACAG TAGAGTTGAA CTGCATGAAC GTACAAATAT TACTTCGCTG
CCAGAAATGG GTTATTCTCA CGTTTTTGAT GTTGCCGTAT GTGACGTATC TTTTACTTCA
ATTTTGTCAA TTCTTCCATC TGTTTTAGAT GTTTTAGCTT CTAAGGGAGT ATTTGTTACG
CTGGTTAAAC CACAGTTTGA GGCTAAGAGG GAAGAAGTGG GTGAGGGCGG CATTGTGACA
AATGCATCCG TGCATCTGCA AACGTTGCAA AAGGTTGCTG ATGCGTTTAA AGAAGCTCAT
ATGGGTCCTC TGGGTGCATG TGAAAGTCCT ATTCATGGTG CTAAAGGTAA TGTGGAATAT
TTACTGTTTG GGCAGCTTGG AGTGGGTCCG TATGATTTGA ATCTTGCTTC AGTGGTGTCG
AATCATTCTG TAGAAATAGT GAAATAG
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| Protein sequence | MAQRISRQRL DKELVRQGFF KDTQAALRSI LAGDVSTKDR KLTSAGELVP EGLFLHVKGA
IPYVSRGGLK LERAFEVFDI TVQHKKCLDI GCSTGGFTDC LLQNGAASVT SVDVGYAQFD
WSLRNDSRVE LHERTNITSL PEMGYSHVFD VAVCDVSFTS ILSILPSVLD VLASKGVFVT
LVKPQFEAKR EEVGEGGIVT NASVHLQTLQ KVADAFKEAH MGPLGACESP IHGAKGNVEY
LLFGQLGVGP YDLNLASVVS NHSVEIVK
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