| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0422 |
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| Symbol | |
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| ID | 8413271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 488470 |
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| End bp | 490290 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021990 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179444 |
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| Protein GI | 257784227 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATC GCGCAGGAGG AGCACGTCCT CAAAATATCG GACATACCAT TAGAGTGTTT
GTTTCGTACT TGGGTCATGC TAAGAAACGC CTTATGTTGG TGGCACTTCT TGTTTCTATT
AGTGGTTTAG CTGCGCTCCT TGGCACCTAT ATGATTAAGC CTGTTGTTGC TGCGGTGGGC
AGGGGAGACG TAAACGCATT CACCAATCTC ATTGTGTTTA CGGCTGTTGT GTATGCAATT
GGTGCTCTTA CTAGTGTGGG TTACACGCAA ATCATGGTTC GCGCTGCTCA GAGGATTGTT
TTTGACATAA GACGAGACCT CTTTGAGCAT ATTGAGTCGT TGCCGTTAAG GTTTTTTGAC
CAGCGTACGC GTGGCGATAT CATGAGTTTC TTTACAAATG ACGTGGATAC TATTTCAGAA
GCGCTCAACA ATAGTTTTGC CAATCTTGTT CTGGCGTTTA TTCAGATGGT TGGTACACTT
GTGCTGCTCA TTGTTCTTAA TTGGCAGTTG ACGCTTATTA CTATTCTCTT TGATGTGTTG
ATTGTAGTAT ATGCGCGTTA TGCAAGTAAG CGTTCAGCTA AGCATTATTC AGTGCAACAA
AAGAGCCTTG GTGTTCTTAA TGGCTTTGCA GAGGAGACCA TTTCTGGACT TAAGGTAGTT
AAAGTCTTTA ATCATGAGGA TGCTAATTTT ACTGATTTTC AAAAGGTGAA TGAGGAGCTA
AGAAGCTCTG GAACAAGCGC TCAGTCATAC GCAGCCACGA TGGTTCCTAT TACTGTTTCT
TTGACTTACA TTAACTACGC AGTAGTTACC GTGGTTGGAG CACTTTTGGC TGTAAATGGA
CACGCTGATG TTGCAAGTCT TGCATCCTAC CTGGTTTTTG TTCGCCAGGC AGCCATGCCG
TTCAACCAGT TCACACAGCT CTCCAACTTC CTGCTCACTG CTCTTGCCGG TGCCGAGCGC
ATCTTTGCTG TTATGGAGAT GACTCCCGAG GTTGATGAGG GTAAGGTTAA ACTGCTTCGC
GTAAGTGGCT ACGAGTCAGG TGACGAATCT TGGGCATGGG TTAAACCATC TGGCGAGAAA
ATCCCTCTTG CTGGAGACGT ACGCTTTGAT GAGGTAACTT TTGGTTACGA CGAGGGACAG
ACGGTTCTTG CTAACCTTTC TTTGTTTGCA AAACCTGGCC AGAAGATTGC CTTTGTTGGT
TCAACAGGTG CTGGTAAAAC AACTATTACC AATCTTATTA ACCGCTTTTA TGATGTTCGC
AGTGGCACTA TCACTTATGA TGGCATTCCT ATTAACGATA TTAAGAAGTC AGCACTTCGC
TCTTCTTTGG GCATTGTATT GCAAGACACG CACCTGTTTA CCGGTACCAT TGCAGATAAT
ATCCGTTTTG GTAAGTTAGA TGCTACCGAT GACGAAGTTA TTGCTGCAGC AAAGATTGCA
AACGCGGACA AGTTTATTCG CCGCATGCCT CGTGGTTACA ACACTGTGCT TACTTCCGAC
GGTGCTAATC TTTCTCAAGG TCAACGACAG CTTCTGGCTA TTGCACGTGC TGCTATTGCT
GATCCTCCCG TACTTATTCT AGATGAAGCA ACTTCCAGCA TTGATACGCG TACTGAGGCA
CTTATCGAGA AGGGCATGGA TGCCCTTATG GCAGGTCGTA CCGTCTTTGT AATTGCTCAT
CGCTTATCTA CGGTACGTAA TGCAAATGCC ATTATGGTAC TTGAACATGG ACGCATTATT
GAGCGCGGCA CTCATGATGA GTTGATTGCT CAGCATGGTG AGTATTATCA GCTTTATACC
GGCTCACGTG AACTTGAGTA G
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| Protein sequence | MANRAGGARP QNIGHTIRVF VSYLGHAKKR LMLVALLVSI SGLAALLGTY MIKPVVAAVG
RGDVNAFTNL IVFTAVVYAI GALTSVGYTQ IMVRAAQRIV FDIRRDLFEH IESLPLRFFD
QRTRGDIMSF FTNDVDTISE ALNNSFANLV LAFIQMVGTL VLLIVLNWQL TLITILFDVL
IVVYARYASK RSAKHYSVQQ KSLGVLNGFA EETISGLKVV KVFNHEDANF TDFQKVNEEL
RSSGTSAQSY AATMVPITVS LTYINYAVVT VVGALLAVNG HADVASLASY LVFVRQAAMP
FNQFTQLSNF LLTALAGAER IFAVMEMTPE VDEGKVKLLR VSGYESGDES WAWVKPSGEK
IPLAGDVRFD EVTFGYDEGQ TVLANLSLFA KPGQKIAFVG STGAGKTTIT NLINRFYDVR
SGTITYDGIP INDIKKSALR SSLGIVLQDT HLFTGTIADN IRFGKLDATD DEVIAAAKIA
NADKFIRRMP RGYNTVLTSD GANLSQGQRQ LLAIARAAIA DPPVLILDEA TSSIDTRTEA
LIEKGMDALM AGRTVFVIAH RLSTVRNANA IMVLEHGRII ERGTHDELIA QHGEYYQLYT
GSRELE
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