| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0420 |
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| Symbol | |
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| ID | 8413269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 484803 |
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| End bp | 486629 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645021988 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_003179442 |
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| Protein GI | 257784225 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGTT CCGCGCAAAT TACTCCAAAT TATTCTGCTC ACGCAGCTGT GGATCAACAC
AGTATGCATA CACATACTTG CGGTGAGCTT CGGGCTGAGC ATATCGGTCA GACCGTTACG
CTTACCGGTT GGGTTTGGCG TCGTCGTGAC TTTGGTGGTC TTATCTTTGT TGATCTTCGT
GATCGTGAAG GCTTGACTCA AATTCTGTTT GACCCAGATG TGAATGCAGA TGTATTTGCA
ACGGCAGAAA CTATTCGTCC TGAGTGGCCT GTTTTGATTA CTGGCACTGT TCAGCATCGT
TCTGAGGGGC AAACTAATGA GGCGTTGGTA ACCGGTGAGG TAGAGGTACT CGCTTCTAAG
ATTGATGTTT TGAATACCAG TGCTGTTCCG CCATTTCAAA TTGAGAATCA TATTGACGTA
AATGAGGATC TTCGTCTGAA GTATCGTTAT GTTGACCTTC GTCGTCCTCA GATGGCACAG
AATCTTCGTT TACGTTCTGA CTTTGCGTTT GCACTTCGCG AGGCATTCCA TAAACGTGAC
TTTACCGAGG TAGAAACTCC AGCGCTGTTT AAATCTACCC CTGAGGGAGC TCGTGACTTT
CTGGTTCCAT CCAGAATGCA GGGTGGAAAC TTCTATGCAC TACCACAGTC TCCACAGCTG
TTGAAGCAGC TGCTGATGAT TGGTGGTGTT GAGCGCTACT ATCAGATTAC TAAATGCTTC
CGTGATGAGG ACTTACGTGC GGATAGGCAG CCTGAATTTA CACAGGTTGA TATGGAAATG
TCCTTTGTTC GTGAAGATGA TGTTATGTCA GAGCTCGAGG ATATTCTCGG CGATGCATTT
GCAAAGATGG GCATTGAGTT TCCAACTCCA CTGCGTAAGA TTCAGTACTG GGACGCTATG
GATACCTATG GCTCCGATAA GCCAGATACT CGTATTGGCA TGGAACTCCA TGATGTTTCT
GGCGTCTTTG CGCAGTCTGG ATTTAAGCTC TTTAGCTCTG CTGCAAATAC CGAGGGCCAG
TTTGTAAAGG CAATTAACGT TAAGGGAGCG GGTACATGGC CTCGTTCCCA AGTAGATAAA
CTTGCTGAGG TTGCAGCAGG CTTTGGTGCC AAGGGCCTTG CATGGGTTGC TTTCAAGGAA
GACGGCTCCG TTGGTGGTCC AATCACAAAG TTCTTCTCGC CAGAAGAGCT TGAGGCTCTG
CGTGCAGAGA TGTCTGCTGA ACCAAAAGAC TTGATTCTGT TTGCAGTTGG CGGACGTCTT
GAAACTGATG AGATTCTTGG TGGTATGCGC CTACATATGG CCAGGGTACT TGAGGTACCG
CGAGAAGGTC ATGATTTCCT CTGGGTTGTT AATTTTCCGC TGTTCCACTG GGATGAAGAG
ACTCAGTCGT ATGCTTCTGA GCACCAGCCT TTTACACTTC CTCGTGAGGA AGAGCTTGAC
CTTCTGGATA CTAATCCTTT GGCTATGGGT TCGTATACGT ATGATTTTGT TATGGACGGC
TTTGAAGCTG GTGGCGGCGG AATGCGTATC CATAATGCTG ACTTGCAGCT TAAAATTCTT
GAGAAGCTTG GTTTTACTGA AGAGCGTGCA AAGGCTCAGT TTGGCTTCTT GATGGAGGCT
TTAACGTTTG GTGCTCCTCC AATGGGTGGT TTTGCCCTTG GTCTTGACCG AGTATGTATG
CTTTTGACAG GATCTGATTC CATCCGTGAT GTCATGGCCT TTCCAAAGAC TACCTCTGGT
TCTGATTTGA TGTCTAGTGC TCCTTCGCCT GTTTCTAACG AACAGCTTAA GGAGGTTTCG
CTTCAAACGC TTCCAAAGGA GGCATAA
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| Protein sequence | MDCSAQITPN YSAHAAVDQH SMHTHTCGEL RAEHIGQTVT LTGWVWRRRD FGGLIFVDLR
DREGLTQILF DPDVNADVFA TAETIRPEWP VLITGTVQHR SEGQTNEALV TGEVEVLASK
IDVLNTSAVP PFQIENHIDV NEDLRLKYRY VDLRRPQMAQ NLRLRSDFAF ALREAFHKRD
FTEVETPALF KSTPEGARDF LVPSRMQGGN FYALPQSPQL LKQLLMIGGV ERYYQITKCF
RDEDLRADRQ PEFTQVDMEM SFVREDDVMS ELEDILGDAF AKMGIEFPTP LRKIQYWDAM
DTYGSDKPDT RIGMELHDVS GVFAQSGFKL FSSAANTEGQ FVKAINVKGA GTWPRSQVDK
LAEVAAGFGA KGLAWVAFKE DGSVGGPITK FFSPEELEAL RAEMSAEPKD LILFAVGGRL
ETDEILGGMR LHMARVLEVP REGHDFLWVV NFPLFHWDEE TQSYASEHQP FTLPREEELD
LLDTNPLAMG SYTYDFVMDG FEAGGGGMRI HNADLQLKIL EKLGFTEERA KAQFGFLMEA
LTFGAPPMGG FALGLDRVCM LLTGSDSIRD VMAFPKTTSG SDLMSSAPSP VSNEQLKEVS
LQTLPKEA
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