| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0417 |
|---|
| Symbol | |
|---|
| ID | 8413266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | + |
|---|
| Start bp | 481701 |
|---|
| End bp | 482939 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 645021985 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003179439 |
|---|
| Protein GI | 257784222 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGGG CAGAGGATTA CTTAAAAAAT ATTGAAAAAG ATCAACTTGG AATTTGGGCT
TATCCAAGTG ATAATATTTA TGATAATTTA CCAACTTCTG GAATAAAAGT ACATATTTCT
GCAATTCCAC AAAATTCTGA GTATATTTTT AAAGCAGTGT ATCCTTTTTT ACAAGAAAAA
AATTTATTAT TTAAGGTTCT TGTATCTGAT CAAATTTTGA TGCGAGAGAA TAGTGGTGAG
TTTGGTTATT CTCAATTAGG TAAATTTATA ACAATTTATC CAAAATCGGA AAATGAGCTC
GTTAGTATTG TTCCTGCTCT TCATATTTTA ACAATTGGGT TTTCTTCAAT TAGAATTCCC
TCAGATTGTA GATATACGAA TGATTCAATT ATATATTATC GATATGGAGA GTTTAAGTCA
GATGAAAATT TTATTGATAA TCGATTAAGC ACTTCAACTA CAAAAAATTT AATCCCAGAT
GACTTGAAAT ATGTTCAGAA AGAACTTTCT ATTATAAAAG AGTTCACCCC GATTAAATGT
ATCCGAGCGA GAGGAAAGTC ATGTGTTTAT CTCGGAATAA TGAATTGTAA TCGCAAAATT
GTAATAATAA AAATGTGGAA TCATATTGGT GAAGGATTAG ATTATTCAGG TTTTGAATTA
TTTAAGCATG AATATAAGTT GTTGAAGTCA TGTGAAAAGC TAAATTCTAT TCCAAATATG
ATAGATTCAT TTTATTACAA GGACTGTTAT GTAATTGTCG AAGAGAACAT GACTGGACAT
TTGCTTCAAG ATTTTTTATT AAAAGAAGTT TCTAGGAAAA AAAGAAAACT TATAATGTGT
GGAATAATTT CAGAGTTAGA AAAGATTGTG TGTAATGGAT TTATTCCTTT TGATATTGCG
CCATCAAATT TGTTATTAAA AGGGAATAAG ATAAAATTAA TCGATTTCGA GTTTTTTCGT
TCAATTGATG AAGACTTACC AACTTACAAT TTCGGAACGC CTGGATTTAT GCACGATAAC
GTACAGCCAA GTAGGCAGTT TATTTTTTCA TTAGCAATGA TAGATTATTA TTTACAAAAT
AGTGTTCAAT ATAAAACGTT GTTAGAAAAT AATGAAGTTA ATGAGGATAC TAAAGACTAT
GTCTATAACA AGTTTAGTTT TATTTTGTCT AAAGAAAATA CCACTTCGCT AGAAGACTGT
CTAAGAATAC TTAAAGAGTA TATAGAGGAG GAAAGATAG
|
|---|
| Protein sequence | MFRAEDYLKN IEKDQLGIWA YPSDNIYDNL PTSGIKVHIS AIPQNSEYIF KAVYPFLQEK
NLLFKVLVSD QILMRENSGE FGYSQLGKFI TIYPKSENEL VSIVPALHIL TIGFSSIRIP
SDCRYTNDSI IYYRYGEFKS DENFIDNRLS TSTTKNLIPD DLKYVQKELS IIKEFTPIKC
IRARGKSCVY LGIMNCNRKI VIIKMWNHIG EGLDYSGFEL FKHEYKLLKS CEKLNSIPNM
IDSFYYKDCY VIVEENMTGH LLQDFLLKEV SRKKRKLIMC GIISELEKIV CNGFIPFDIA
PSNLLLKGNK IKLIDFEFFR SIDEDLPTYN FGTPGFMHDN VQPSRQFIFS LAMIDYYLQN
SVQYKTLLEN NEVNEDTKDY VYNKFSFILS KENTTSLEDC LRILKEYIEE ER
|
|---|
| |