Gene Apar_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0389 
Symbol 
ID8413238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp450696 
End bp451184 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content43% 
IMG OID645021957 
Productprotein of unknown function DUF322 
Protein accessionYP_003179411 
Protein GI257784194 
COG category[S] Function unknown 
COG ID[COG1302] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGAAG AGCTTACTAA TTCACAAGAG ACCACCTCTG AAGAAATTAT TCCTGCGGAA 
GAAACAACAG ATGTTCTCTC CGATGCAGAT CTCGAGGATA CAGATTCCCT TACTTTCTCT
GGTGGAGTTG TTGAGAAGAT TGTCTCACTG GCCTTGCGTG ATGTTCCTAA TGTAGTGGGT
GCTCGTGGGA ATTGGCTTAA CAGGGTTCAA GACGTACTTG GTGCATCTGA TACGGCTAAA
GGTGTCACTG TTGAAGTATT GCCTGATAGT TCGCTAAATG TCACCGTTTC TGTTCTTATT
AAATATGGCT CTTATGCTCC TCAGATTTTT GAAGACGTTA AGCATACGAT TGTTGAGAAA
ATTACAGGTA TGACAGGACT TGAAGTTTCT GGTGTTAGCC TGCGTATAGA AGATGTTTTG
ACTGACGAGG AATATGACCG CCTAAAACAG CGTCCGGAAG AGCCTGAACA GTTAGATAAA
GAAGAGTAA
 
Protein sequence
MAEELTNSQE TTSEEIIPAE ETTDVLSDAD LEDTDSLTFS GGVVEKIVSL ALRDVPNVVG 
ARGNWLNRVQ DVLGASDTAK GVTVEVLPDS SLNVTVSVLI KYGSYAPQIF EDVKHTIVEK
ITGMTGLEVS GVSLRIEDVL TDEEYDRLKQ RPEEPEQLDK EE