| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0368 |
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| Symbol | |
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| ID | 8413217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 422106 |
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| End bp | 423020 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645021936 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003179390 |
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| Protein GI | 257784173 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTGA CTCAACTCAA ATATGTTCTT GCCATTGCTA AGGCAGGCAC CATTAACGCC
GCAGCTAAAC AGCTCTTTAT CTCGCAGCCT ACTCTAAGTA GCGCAGTTAA AGAGCTTGAA
GCCGAGCTGG GAATCTCCCT TTTTAACAGG ACCAGCAAGG GTGTTGAACC TACCGCAGAT
GGCGAGGAGT TTTTGAGTTA CGCCAGGCAA GTTGTCATGC AGACCGATCT CATTGAAGAG
CGCTATCTGG GCACTGCTCC CACTAAGCAG CGCTTCTGCG TTTCTTGCCA GCACTATTCC
TTTGCAGTTG AAGCCTTTGT CAACCTGATT AAAGAACACG GCGGCTCAAA GTACGACTTC
CGTATCAGAG AGACGCAAAC CTACGAGATT ATTGAAGACG TATCCAAGCT AAGAAGTGAG
GTAGGCGTTC TCTACCTCAA CTCATTCAAC GAGCGTGTTA TTAGAAAAAC ACTGCAGGAT
CAGGGCCTGG TCTTCTCGCC ATTGTTTAAG TGCAAGCCAA GCGTTTTTGT GGGAAAAGAT
AACCCGCTGG CAAAACGTCC ATCAGTGACG CTCAACGATC TTGCCCCCTA CCCTCGTCTT
TCTTATGAGC AGGGCGAGCA TAACGCGTTC TATTTCTCCG AGGAACTTCT GGCAACACTT
GATCGCGATA AGGACATCAT GGTCCGAGAC CGCGCTACTA TCTTCAACCT GATTATTGGC
CTAAACGGCT ATACCATCAG CACCGGCCTT ATTAATGAGG AGCTCAACGG ACCAAACATT
GTTGCAGTTC CTTTGGCTGT TGATGACTAC ATGGAAGTTG GCTACGTTAC ACATGACGAG
AAGAGCCTCT CGCTCTTTGG TGAACTTTAC ATCGACGCGC TTAAGCGCTG CTGCCAAGCA
GTTACGTGGG TGTAG
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| Protein sequence | MTLTQLKYVL AIAKAGTINA AAKQLFISQP TLSSAVKELE AELGISLFNR TSKGVEPTAD
GEEFLSYARQ VVMQTDLIEE RYLGTAPTKQ RFCVSCQHYS FAVEAFVNLI KEHGGSKYDF
RIRETQTYEI IEDVSKLRSE VGVLYLNSFN ERVIRKTLQD QGLVFSPLFK CKPSVFVGKD
NPLAKRPSVT LNDLAPYPRL SYEQGEHNAF YFSEELLATL DRDKDIMVRD RATIFNLIIG
LNGYTISTGL INEELNGPNI VAVPLAVDDY MEVGYVTHDE KSLSLFGELY IDALKRCCQA
VTWV
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