Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0351 |
Symbol | |
ID | 8413200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 400106 |
End bp | 403861 |
Gene Length | 3756 bp |
Protein Length | 1251 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645021919 |
Product | phosphoribosylformylglycinamidine synthase |
Protein accession | YP_003179373 |
Protein GI | 257784156 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain |
TIGRFAM ID | [TIGR01857] phosphoribosylformylglycinamidine synthase, clade II |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCTGC GCGTCTACGT CCAAAGAAAA CCAGGTTTCG AGGGCGAGGC AAAAGCCCTG CTCAAAGAAG TGAAAGATCT TCTTGGTATT ACCGAGTTAC AACGCATTGA CCTGTTCAAC CGCTACGATG TTGAAGGAAT TTCAGAGGAG CTCTTTGAGT CCTGCATCCC CACCGTTTTT TCTGAGCCAC AGTCCGATTT TGCCAGCCGT ACCATGCCAG AATTTTCTTC TGAAGGTGCA GCTGTTCATA CGTTTGCTGT TGAGTTTTTG CCTGGACAGT TTGACCAACG CGCAGACTCT GCTGCTGAAT GCGTACAGCT CATCAGCCAG GGAGAACGCC CTCTTGTCCG CTCTGCTCGC CTTTATGTGC TAACCGGAAA CCTTACTGAG GCAAACGTTG CCGCCATTAA GAACTACCTG ATTAACCCCG TTGAGGCTCG CGAGGCATCC CTTGAGCTAC CCGAGACTCT CAAGATTTCC ATTCCAGAAC CTGCTGACGT AGAGGTTCTT GAGGGTTTTA ACGCCCTTGA CCAAGACGGT CTCAAAGAGT TCATTTCTTC TCACGGCCTT GCTATGGACC TGGCTGACCT CACCTTCTGC CAACAGTACT TCACCGATGA GCAGCGAGAC CCAACCATCA CCGAGATTCG CGTCATTGAT ACCTACTGGT CAGACCACTG CCGCCACACC ACTTTTAACA CCGGAATTAC CGGCGTACAG ATTGATGATG ACCTGGTAAA GGCTGCGTTT GAAAAGTATC TCTCCATGCG TAAAGAGCTT GGGCGAGAAG ATCGTGCCGT GTCTCTTTGG GATATGGCAA CTATTGGTGC AAAGTACCTT CGCAAGAAGG GTATCCTCAC CAATCTTGAT GAGTCAGAAG AGATTAACGC TTGTACCGTA AAGGTCAAAG TAGACGTTGA CGGCAAAGAC GAAGACTGGC TCTTCCTCTT CAAGAACGAG ACTCATAACC ACCCAACCGA AATTGAACCT TTTGGTGGCG CAGCAACCTG CATCGGCGGT GCTATCCGCG ACCCTCTTTC TGGCCGCAGC TACGTCTACC AGGCAATGCG CGTCACTGGT GCTGCAGACC CAACCGTTCC TGTTTTCCAG ACACTTCCTG GAAAGCTTCC CCAGCGCACC ATCGTACGCA CGGCAGCTGC AGGTTATTCC AGCTACGGCA ACCAGATTGG CCTTGCTACC GGTCAAGTTT CTGAGCTCTA CCACCCAGGC TACGTTGCAA AACGCATGGA GATTGGTGCT GTTGTAGGCG CAACTCCTCA AAGCCACGTC CGTCGCGAAC GCCCAGAAGA TGGCGACGTC ATTGTTCTTC TCGGCGGCCG CACTGGTCGC GATGGCATTG GCGGCGCAAC TGGTTCTTCC AAGGCTCACG ACGCAGGCTC TATTGAGCGC GACGGCGCCG AGGTTCAGAA GGGTAACGCC CCTGTTGAGC GCAAGCTTCA GCGTCTCTTC CGCCGTGAAG ACGCTTGCAA GCTTATCAAG CGCTGCAATG ACTTTGGTGC AGGTGGCGTT TCTGTTGCTA TTGGCGAGCT TGCCGACGGC CTTGACGTTA ACCTGGACGC TGTTCCTAAA AAGTACGACG GTCTTGACGG CACTGAACTG GCAATCTCCG AGTCTCAGGA GCGCATGGCT GTTGCGCTTG AGGCAAAAGA CGTTGAGCAG TTCTGCGCAT ACGCCCGCGA AGAAAATCTC GAGGCAACCA TTGTGGCAAC AGTCACTGAA GACCCTCGTT TAGTCATGCG TTGGCGCGGT CAGAAGATTG TCAACATCAG CCGCGCATTT CTCGCCTCAA ACGGCGCGCC TAAATCAATC ACCGTACGCC TGGCCAAACC TCTTGTCTAC CAGCGCACCT GGGCAGGCTC AACCCTTGGC GAGAAACTCC ACTCGCTGGT ACGCGATTTA AACGTTGCCT CTAATAAGGG CCTCTCCGAG CGCTTTGACT CCACTATTGG CGCAGGTACT GTCCTCATGC CCTTTGGTGG TGCTCGCCAG CTAACCCCTG CCCTTTCTAT GGTGGCTAAG CTCCCTGTTA TGGGCCAAAC CAGCACCGTC TCGGGCATGG CCTGGGGCTT TAACCCCTAC CTCATGGAGG CTGACCAGTT CCGCGGTGCA TACCTCTCTG TTGTCGAGTC CGTCTCCAAG TTGGTTGCTA CCGGCTTTAA GTACCAGGAC CTCTACCTCA CTTTCCAGGA GTACTTCGAG AAACTTGGCC AGAATCCAAA CCGTTGGGGC AAACCTACCT CAGCACTGCT CGGCGCACTG ATGGCGCAGG TCAACCTTGG TCTTGCGGCT GTTGGTGGTA AGGATTCCAT GTCCGGTACC TTTGAGGACT TGGACGTTCC ACCAACACTG GTTTCGTTTG CCACCGGCCT TACCAAAGTA GACAAGATTG TCTCCAACGA GTTCAAGGGC GCAGGTCATA GGCTTATCTC TATTGTTCCG TCCTACGACG AGAGCGGTCT TCTCCCCAAC AACGAGTCCC TGCTTACCGC ATACAAGCTG GTCAGCACTC TTGTCCAGTC CAAGAGTGCG CTTGCCATCA CCACACCAGG TTACGGCGGC GTAGCCGAGG CTCTCTTCAA GAGCTGTCTG GGCAACAAGC TGGGCGTTGA GCTTGTGCCA GAGATTTCTG CCAACGCGCT CTTCTCGCCA ACTTACGGTG CCTTCATTGT TGAGCTGGCA GACGGCGTAT CCGTTGACGA CGTCGACGGC GTGTGCGTAG CTCCGCTAGG CGCCACCACG TCCGAGTACA CCTTCAGCGC ATGTGGCGAG AAAATCGATC TCTCCGAGCT TCAGGAAGCG TGGGAGCGCC CACTTGAGGA AGTCTTCCCT TACCGCGGAG GCTCCGACGA GGCTGTGGAG AAAATCAGCT TCGATGGTGC ATCCACACGA CACTCCTACG CTGGTCCAAC CCTTATCGCA CCTGCTCGCC CACGCGTCAT CATCCCCGTA TTCCCAGGTA ACAACTGCGA GTACGATGTT GCGCGTGCCT TTGAGCGTGC GGGCGCTGAC CCAACCACGC TGGTCATCAA CAACCTGACA CCTCAAGACA TTGTTGAGTC CGCAAATGCG CTGGCAGAGT CTATCAAGAA GAGCCAGATT GTCATGATTC CAGGCGGCTT CTCCGGCGGA GACGAGCCAG ACGGATCTGC TAAGTTCATC TGCGCTCTCT TCCGTGCTCC TCAGGTTACC GAGGCTGTTT GCGACCTTCT ACAGCAGCGC GATGGACTTA TGCTGGGCAT CTGCAATGGC TTCCAAGCAC TCATCAAGCT GGGCCTTGTT CCTTACGGCA ACATTCGTCC TATGGACGAC ACCTGTCCAA CGCTAACGTT CAACACCATC GGCCGTCACC AGAGCCAGCT TGTTCACACC AGCGTTGCAT CAACGATGTC CCCATGGCTC TCCAAATGCG CGCTTGGCGA CATTCACACC ATTGCAATTA GCCACGGAGA AGGCCGCTTT GTTGCCTCCG ACGAGCTGCT TGAGACGCTC AAGGCAAACG GCCAGATTGC AACGCAGTAC GTTGACGCAA CAGGTACTCC AAGCATGGAC TTCTCCGTTA ACCCTAACGG CTCCGTCCTG GCTATCGAGG GCATCACCAG CCCCGACGGT CGTATCTTGG GCAAGATGGG TCACACGGAG CGCTCTGGCG CAGGCCTCTA CAAGAACATC CCCGAGCTCA CCCCTGGCGA CCAGTTCCAG CCTCTCATTG AGGGCGGCGT CGAGTACTTC AAGTAA
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Protein sequence | MVLRVYVQRK PGFEGEAKAL LKEVKDLLGI TELQRIDLFN RYDVEGISEE LFESCIPTVF SEPQSDFASR TMPEFSSEGA AVHTFAVEFL PGQFDQRADS AAECVQLISQ GERPLVRSAR LYVLTGNLTE ANVAAIKNYL INPVEAREAS LELPETLKIS IPEPADVEVL EGFNALDQDG LKEFISSHGL AMDLADLTFC QQYFTDEQRD PTITEIRVID TYWSDHCRHT TFNTGITGVQ IDDDLVKAAF EKYLSMRKEL GREDRAVSLW DMATIGAKYL RKKGILTNLD ESEEINACTV KVKVDVDGKD EDWLFLFKNE THNHPTEIEP FGGAATCIGG AIRDPLSGRS YVYQAMRVTG AADPTVPVFQ TLPGKLPQRT IVRTAAAGYS SYGNQIGLAT GQVSELYHPG YVAKRMEIGA VVGATPQSHV RRERPEDGDV IVLLGGRTGR DGIGGATGSS KAHDAGSIER DGAEVQKGNA PVERKLQRLF RREDACKLIK RCNDFGAGGV SVAIGELADG LDVNLDAVPK KYDGLDGTEL AISESQERMA VALEAKDVEQ FCAYAREENL EATIVATVTE DPRLVMRWRG QKIVNISRAF LASNGAPKSI TVRLAKPLVY QRTWAGSTLG EKLHSLVRDL NVASNKGLSE RFDSTIGAGT VLMPFGGARQ LTPALSMVAK LPVMGQTSTV SGMAWGFNPY LMEADQFRGA YLSVVESVSK LVATGFKYQD LYLTFQEYFE KLGQNPNRWG KPTSALLGAL MAQVNLGLAA VGGKDSMSGT FEDLDVPPTL VSFATGLTKV DKIVSNEFKG AGHRLISIVP SYDESGLLPN NESLLTAYKL VSTLVQSKSA LAITTPGYGG VAEALFKSCL GNKLGVELVP EISANALFSP TYGAFIVELA DGVSVDDVDG VCVAPLGATT SEYTFSACGE KIDLSELQEA WERPLEEVFP YRGGSDEAVE KISFDGASTR HSYAGPTLIA PARPRVIIPV FPGNNCEYDV ARAFERAGAD PTTLVINNLT PQDIVESANA LAESIKKSQI VMIPGGFSGG DEPDGSAKFI CALFRAPQVT EAVCDLLQQR DGLMLGICNG FQALIKLGLV PYGNIRPMDD TCPTLTFNTI GRHQSQLVHT SVASTMSPWL SKCALGDIHT IAISHGEGRF VASDELLETL KANGQIATQY VDATGTPSMD FSVNPNGSVL AIEGITSPDG RILGKMGHTE RSGAGLYKNI PELTPGDQFQ PLIEGGVEYF K
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