Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0346 |
Symbol | |
ID | 8413195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 395517 |
End bp | 396572 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645021914 |
Product | UDP-glucose 4-epimerase |
Protein accession | YP_003179368 |
Protein GI | 257784151 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1087] UDP-glucose 4-epimerase |
TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGATA CGTCTACCTC ATCAAATGGC TGCGTACTTG TTACTGGTGG TGCGGGCTTT ATTGGTAGCC ATACCGTTGT TGAACTGCTC AACTCCGGCT ACGAGGCTGT AATTGTTGAT GACCTCTCCA ATGCCTCGGC AAAGGTTATT GATCGCATCA AAACCATTGT GGGAGAAGAG AACGCCAAGC GTCTTTCGTT CTATAAGGCA GACGTCAATA ATGCAGACGC ACTGAACCGT ATCTTTGACG AGCATCCTAT TAATTTTGTT ATTCATTTTG CAGGTTTCAA AGCTGTTGGC GAGTCTGTTA CCAAGCCTAT TGAGTACTAC ACAAACAACC TGGGTAACAC CCTCACCCTT CTTGATGTCA TGAGGAACCA TGGCTGCAAG TCAATTATTT TCTCGAGCTC TGCAACTGTC TACGGAGACC CAGATAGTCT TCCTCTGACC GAGCGAAGTC CCAAGAAGAA CGCAACCAAC CCTTACGGCT GGACCAAGTG GATGATTGAG CAAATTCTCA CCGACGTTCA CACTGCAGAT CCAGAGTGGA ACGTTGTTCT GCTCAGATAC TTCAATCCTA TTGGCGCTCA CCAATCTGGC CTCATCGGAG AAGATCCTGC AGGTATTCCA AATAACCTAG TCCCTTACGT GGCTCAGGTT GCCGTGGGCA AGCGCGAGGC AGTTCACGTC TTTGGCGACG ACTACAACAC TCCAGATGGC ACGGGCGTTC GCGACTACAT CCACGTCTGT GACCTTGGCT CCGGCCACGT TGCTGCACTT AAGTGGATGG CTGGCCGTAC CGGCGTTGAG GTCTTCAACC TGGGTACCGG CACTGGTAGC TCAGTACTTG ACGTTATCAA GGCATTCTCA AAGGCTTGCG GCAAAGAGAT TCCTTATGTC ATTGAGCCTC GTCGTGCAGG TGACGTTGCA ACCAACTACG CCGACTGCCA GAAGGCTGCT AAGGTACTTG GCTGGAAGGC TCAGTACAAT CTTGCCGACA TGTGCCGCGA CTCCTGGAAG TGGCAGTCAA TGAACCCAGA CGGCTATCGC GGCTAG
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Protein sequence | MSDTSTSSNG CVLVTGGAGF IGSHTVVELL NSGYEAVIVD DLSNASAKVI DRIKTIVGEE NAKRLSFYKA DVNNADALNR IFDEHPINFV IHFAGFKAVG ESVTKPIEYY TNNLGNTLTL LDVMRNHGCK SIIFSSSATV YGDPDSLPLT ERSPKKNATN PYGWTKWMIE QILTDVHTAD PEWNVVLLRY FNPIGAHQSG LIGEDPAGIP NNLVPYVAQV AVGKREAVHV FGDDYNTPDG TGVRDYIHVC DLGSGHVAAL KWMAGRTGVE VFNLGTGTGS SVLDVIKAFS KACGKEIPYV IEPRRAGDVA TNYADCQKAA KVLGWKAQYN LADMCRDSWK WQSMNPDGYR G
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