| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0334 |
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| Symbol | |
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| ID | 8413182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 381732 |
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| End bp | 382658 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645021901 |
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| Product | Transketolase central region |
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| Protein accession | YP_003179356 |
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| Protein GI | 257784139 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGAG CAACTCGTGA GGCATATGGT CAGACTCTTG TTGAGCTGGT TAACGAGGGT
CACGATATTA TTGCCGTTGA TGCTGACCTT GCTGGCTCCA CTAAACTTGC TGACCTCCAG
AAAGCTTTCC CACAGCGCAT GGTTGACGTG GGCATTGCCG AGCAAAACAT GGTGGGCGTT
GCGTCAGGAC TTTCGCTCAC AGGACGTACT GTGTTTACCG GCTCGTTTGC TGTGTTTGCA
ACCGGTCGCG CCTATGATCA GATTAGAAAC ACCGTCTGTG ATTCCGGTCT TAACGTAAAG
ATCTGCCCAA CACATGCAGG TATTACGGTA GGAGAGGACG GCGCTACTCA CCAGTCTCTT
GAGGATATTG GCATGATGCG TGCCCTGCCT CAGATGCGCG TGCTTGTTCC TGCAGATTAC
AATGCTACTA GGGCAGCGCT CAGGCTTGCT GCCGAGGCTG ATGGCCCGTT TTATGTGCGT
ATGGGTCGTC ACAAAGTTGC CGATATTTAC GACGAGTCCT TCAAGGGCGG TCTGCCTTTT
GCAAATGTCT TGCGAGAGGG TACAGATGTC ACAATTGCTG CCTGTGGTGT GGAGGTTGCT
CAAGCACTTG CTGCAGCAGA CTTGCTGGCA GAGGAGAAGA TTTCTGCCGA GGTTATCGAT
GTGTTTTCCA TTAAGCCTTT GGACGAGGAA GTTATTTTGG CTTCTGCCGA GAAGACCCGT
CATGTAGTAA CTGTTGAGGA GCATAACGTG GCAACAGGTC TTGGAGCTGC AGTTGCTGAG
CTTCTTGCTG AGCAGCTGCC AACGCCTATG CGCTTTGCTG GTATGCGCAC GTTTGGCACC
TCCGCTCCTG GTGACGTACT ACTTTCACAC TTTGGCTTGG ATGCCGAGGG CATTGCTGCT
CGCGTCAGGG AGTTTGTGCT CTCGTAG
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| Protein sequence | MSRATREAYG QTLVELVNEG HDIIAVDADL AGSTKLADLQ KAFPQRMVDV GIAEQNMVGV
ASGLSLTGRT VFTGSFAVFA TGRAYDQIRN TVCDSGLNVK ICPTHAGITV GEDGATHQSL
EDIGMMRALP QMRVLVPADY NATRAALRLA AEADGPFYVR MGRHKVADIY DESFKGGLPF
ANVLREGTDV TIAACGVEVA QALAAADLLA EEKISAEVID VFSIKPLDEE VILASAEKTR
HVVTVEEHNV ATGLGAAVAE LLAEQLPTPM RFAGMRTFGT SAPGDVLLSH FGLDAEGIAA
RVREFVLS
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