Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0297 |
Symbol | |
ID | 8413145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 344065 |
End bp | 344811 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645021864 |
Product | MORN repeat-containing protein |
Protein accession | YP_003179319 |
Protein GI | 257784102 |
COG category | [S] Function unknown |
COG ID | [COG4642] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.424224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.101065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTTCTC CTACGCGTTT TTCTGCTAAA AAAAGAAACG CTCGCCATAC AAATAAAGAG GCGGATACTC TCGAGCCTTC TTCTGAGGCA AGGGAAGTTG CATCTGTAGA AACACAGCAA GTTCCCACAG AGAAGGCTGA TGCTACTGGA AGCCCAGTAG TTTTTCTGCA GACTGTATCT GAGCAACTTT CATCAGCTTT TAAGTTATTT GCTCAGCGTA AGCCTGTAGA AGACTCAAAG TCTAAGGTTG TACCAGAAAA AAAGAAGAGC GAGAAAACAT CTCTGTCTTC ACGTAAAAAC ACTCGTGTGG AGATGCACCA TCGCGTTCAA GCAGATCCTG AGCCAGAAGA GCGTCATTCT CGCCCCGTGA GTGCGGGTAG GAAAAAGCTC GAGTTGATAA GCGTTGTTGC AATTTTGCTA CTTGCGGTGC TCTCGATTGT ATTGGTTAAC CGACCAAGTA CAAAAACGCT GGTATTTGGC AATAATCAGG TTACTTATAC CGGCACTACC ATTCAGGGAA AGATGAATGG CCAAGGCAAG ATGACCTTTG AAAATGGCGA TACTTACGAG GGAGAATTTG TTGACGGGTA TTTCCAAGGT CAGGGAACGT ATACCTCAAA AGACGGCTGG ACGTACGAAG GTCAATTTGT AAAAGGCCAG GCAGATGGCC AAGGAAAGCT CACTACGCAA GATAATATTG TGTACGAAGG AACTTTTAAG CAAGGGATTT ATCAAAGTGC GAATTAA
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Protein sequence | MSSPTRFSAK KRNARHTNKE ADTLEPSSEA REVASVETQQ VPTEKADATG SPVVFLQTVS EQLSSAFKLF AQRKPVEDSK SKVVPEKKKS EKTSLSSRKN TRVEMHHRVQ ADPEPEERHS RPVSAGRKKL ELISVVAILL LAVLSIVLVN RPSTKTLVFG NNQVTYTGTT IQGKMNGQGK MTFENGDTYE GEFVDGYFQG QGTYTSKDGW TYEGQFVKGQ ADGQGKLTTQ DNIVYEGTFK QGIYQSAN
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