Gene Apar_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0297 
Symbol 
ID8413145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp344065 
End bp344811 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content45% 
IMG OID645021864 
ProductMORN repeat-containing protein 
Protein accessionYP_003179319 
Protein GI257784102 
COG category[S] Function unknown 
COG ID[COG4642] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.424224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.101065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTCTC CTACGCGTTT TTCTGCTAAA AAAAGAAACG CTCGCCATAC AAATAAAGAG 
GCGGATACTC TCGAGCCTTC TTCTGAGGCA AGGGAAGTTG CATCTGTAGA AACACAGCAA
GTTCCCACAG AGAAGGCTGA TGCTACTGGA AGCCCAGTAG TTTTTCTGCA GACTGTATCT
GAGCAACTTT CATCAGCTTT TAAGTTATTT GCTCAGCGTA AGCCTGTAGA AGACTCAAAG
TCTAAGGTTG TACCAGAAAA AAAGAAGAGC GAGAAAACAT CTCTGTCTTC ACGTAAAAAC
ACTCGTGTGG AGATGCACCA TCGCGTTCAA GCAGATCCTG AGCCAGAAGA GCGTCATTCT
CGCCCCGTGA GTGCGGGTAG GAAAAAGCTC GAGTTGATAA GCGTTGTTGC AATTTTGCTA
CTTGCGGTGC TCTCGATTGT ATTGGTTAAC CGACCAAGTA CAAAAACGCT GGTATTTGGC
AATAATCAGG TTACTTATAC CGGCACTACC ATTCAGGGAA AGATGAATGG CCAAGGCAAG
ATGACCTTTG AAAATGGCGA TACTTACGAG GGAGAATTTG TTGACGGGTA TTTCCAAGGT
CAGGGAACGT ATACCTCAAA AGACGGCTGG ACGTACGAAG GTCAATTTGT AAAAGGCCAG
GCAGATGGCC AAGGAAAGCT CACTACGCAA GATAATATTG TGTACGAAGG AACTTTTAAG
CAAGGGATTT ATCAAAGTGC GAATTAA
 
Protein sequence
MSSPTRFSAK KRNARHTNKE ADTLEPSSEA REVASVETQQ VPTEKADATG SPVVFLQTVS 
EQLSSAFKLF AQRKPVEDSK SKVVPEKKKS EKTSLSSRKN TRVEMHHRVQ ADPEPEERHS
RPVSAGRKKL ELISVVAILL LAVLSIVLVN RPSTKTLVFG NNQVTYTGTT IQGKMNGQGK
MTFENGDTYE GEFVDGYFQG QGTYTSKDGW TYEGQFVKGQ ADGQGKLTTQ DNIVYEGTFK
QGIYQSAN