| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0286 |
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| Symbol | |
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| ID | 8413134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 327164 |
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| End bp | 329203 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645021853 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_003179308 |
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| Protein GI | 257784091 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0769555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAGC TTGCACACGT TTTTTCGCTT ATTGTTCAAC CCGCATATGA CTTGACCGGT
AGTTGGTGGG CGGCAATTTT CCTTTTTACC TTTGCGACTA AAATTATTCT GATGCCTTTG
GCGCTTTGGA CGCAGCAAAA CTCTATTGTT ATGGTACGTC TTATGCCCGA GACCTTCCGC
TTGAAGACGC GTTACTTTGG CGATAAAGAG ACAATCGAGG AGCGTTCAAA TGAGCTCAAC
AAAAAGGCAG GCTATCACCC ACTTCTAAGC CTTATTCCTC TTGCAATTCA GGTAGTCATT
CTGTTTGGTC TGGTTGACGT CATTCATGGC ATCACAGATT CCGGTGCTCC TGGCACTGAG
TTTTTGGGTA TGACCCCAAT CATTGATGGT GGTATCACTT GGATTATGCC ACTAGCAGCA
GCTCTTTCTT CAGTAGCCTT AGGTCTTGCC TCCAACAAGC TGAATCCACT TCAGCGCGAG
CAGTCCCGTG CTGAGAAGAA CACCACAAAT GGTCTTTCCA TTGCAATGTC GCTTGTGTTA
GCAGTTTACG TTGTTTGCGG CATGGCGTTC TACTGGGTTT GCTCAAATCT CCTTTCAATT
CTTGTCCAAA TCGTATGTAA CATTATTATT GACCCTCGTA AACAGGTTGA TTACGAGGAT
TTGAATGCTG CGCGTGATGA GTTTGAGGCA ATGGACGCAG CAACCAAGTC CACTCACAAA
TGGTTCCAGC GCGATCCTCA TGCCGCCCGC GAAAAAGAAG ATTACAAGCG CTTCTTTGAT
ACTATTGGCA AGCACTTAGT TTTCTACTCC GAATCAAGTG GCTTCTACAA ATACTTTCAA
GGCGCAATTG AGTGGCTGTT GGCAAATTCT GACATTTGTG TCCACTACGT TACCTCTGAC
CCTAATGATC AGGTCTTTGA GCTTGCAAAA CAGCAGCCTC GTCTGATTCC GTACTACTTG
GGTCAGCGTC GCCTTATCAC GCTTTTTATG AAGCTTGACG CGGACGTTGT AGTTACTTCC
CTCGGTGATC TGGAGAGCTC TTACATGAAG CGCTCCTACG TGCGTAAAGA CGCTGAGTAC
ATGTATATGT GCCACCACAT GACTTCTATG ACGGTCACCT CAACACGCAA CGAGTACACC
TACTACGATG ACGTTCTGTG CGTTGGTCCT CATCAGCAAC ATGATCTTGA GCTGGTCGAG
AAGTACTACG GTACGCCATC AAAGAGAAAG CCTGCCATTG GTTACGATCT TCTCGATAGA
TCAATCCAGA ATTACCAGAA GCAGAATCTG GGCCAGCGTA AACCTGGCGA GAAACCCCTG
TTGTTGATTG GTCCTTCGTG GCAGTACGAC AACTTGATGG ACAGCTGCCT TGACGGAATT
CTTAAGCAGC TTATGGGTCG TGGCTGGCGC ATTGTGGTTC GTCCGCACCC AGAATATTTG
AAGCGTTATC CTGCCCGTAT GGAAGAGATT CTTGCTCGCT ATGCTGACGC GGATCCCGAG
GAGCTTTCCT TTGAGACTGA TTTCAGCTCC AACACTTCAG TTCTCTCAGC TGACCTGCTC
TTTACTGACT GGTCAAGTGT TGCCGAGGAG TTCTCGTTTA CTACGCTCAA GCCGTCGGTC
TTCATTGACA CTGCAATGAA GGAGAATAAT CCCGATTGGA GCAAAATCCA CTCGGATCCA
TGCGATATTA CGTTGAGAAA TCAGATTGGT CGTAGTTTTG ATCCTAAGGA TCTCTCGGGT
CTTGGCGATG CAGTTGCACA GATGCTTGAA GAGACTGATA GCTGGTCGCA TAAGATTGAA
GAAATTCGCA ACAACATGAT CTTCAACCTT GGTCACGGCG GAGAAGCTGC AGGTAAATTT
ATCCTCGAAC GTGTTTTAGC ACATCAAGAG GAGGCTGCTG AGCAGGGTGA TGCCGCAGGT
GCTAACACGA CTTCCAAGAA GAGTGATGCT GTTGAGGCTG ACGCTGCCGA CAAGGGCAAC
GTTGCCGCCA TCGACGAAGT CACAACAACA ATTGATGAGG ACGGTGTTTC TCGTGATTAA
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| Protein sequence | MEQLAHVFSL IVQPAYDLTG SWWAAIFLFT FATKIILMPL ALWTQQNSIV MVRLMPETFR
LKTRYFGDKE TIEERSNELN KKAGYHPLLS LIPLAIQVVI LFGLVDVIHG ITDSGAPGTE
FLGMTPIIDG GITWIMPLAA ALSSVALGLA SNKLNPLQRE QSRAEKNTTN GLSIAMSLVL
AVYVVCGMAF YWVCSNLLSI LVQIVCNIII DPRKQVDYED LNAARDEFEA MDAATKSTHK
WFQRDPHAAR EKEDYKRFFD TIGKHLVFYS ESSGFYKYFQ GAIEWLLANS DICVHYVTSD
PNDQVFELAK QQPRLIPYYL GQRRLITLFM KLDADVVVTS LGDLESSYMK RSYVRKDAEY
MYMCHHMTSM TVTSTRNEYT YYDDVLCVGP HQQHDLELVE KYYGTPSKRK PAIGYDLLDR
SIQNYQKQNL GQRKPGEKPL LLIGPSWQYD NLMDSCLDGI LKQLMGRGWR IVVRPHPEYL
KRYPARMEEI LARYADADPE ELSFETDFSS NTSVLSADLL FTDWSSVAEE FSFTTLKPSV
FIDTAMKENN PDWSKIHSDP CDITLRNQIG RSFDPKDLSG LGDAVAQMLE ETDSWSHKIE
EIRNNMIFNL GHGGEAAGKF ILERVLAHQE EAAEQGDAAG ANTTSKKSDA VEADAADKGN
VAAIDEVTTT IDEDGVSRD
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