Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0242 |
Symbol | |
ID | 8413090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 285038 |
End bp | 285979 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645021810 |
Product | carbamate kinase |
Protein accession | YP_003179265 |
Protein GI | 257784048 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0549] Carbamate kinase |
TIGRFAM ID | [TIGR00746] carbamate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000109106 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.377226 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAGC GTATTGTAAT TGCTTTGGGT GGTAATGCCC TTGGCAAAAA TTTACCTGAG CAGATGATTG CAGTAAAGCA TACTGCTAAG GCAATTGTTG ATTTAATTGA GCAAGGTAAT GAAGTTATTA TCGCCCACGG TAATGGCCCA CAAGTTGGCA TGATCCAAGA GGCTATGACC CAGCTTAATC GCTCTGATCC AGAGAAATAT ATTCCTTGCC CACTTTCTGT ATGTGTTGCC ATGAGCCAGG GATATATTGG CTACGATCTT CAGAATGCGC TTCGTGAAGA GATGCTTAAC CGCGGCATTA AGAAAAATGC AGCTACGGTT CTTACTCAAG TTGAAGTTGA TAAGAATGAT CCAGCATTTA AGAATCCTAC TAAGCCCATT GGTTCTTTTA TGACAGAAGA AGAAGCCAAA AAGATGGTAG CTGAGCGTGG ATATAACATT GTTGAGGACG CTGGTCGAGG ATACCGTCGT GTAGTTGCAT CTCCTCAGCC TGTTGCTATT GTTGAGCTTG ATACCATTCG TTCACTTATT GAGACGGGCA ATGTCGTTAT TGCTTGTGGT GGTGGCGGTA TTCCAGTATT TATTACTGAA GGCAATCATC TTAAGGGTGC TGCAGCTGTT ATTGATAAGG ATTTTGCAGC AGCTCGTCTT GCAGAGCAGG TTAATGCGGA TGCACTCATT ATTTTAACGG CTGTCGAGAA GGTCGCTATT CATTTTGGTA CCCCTGAACA GGAAGACCTC TCTGAGCTTA CACCTGAGAG TGCACAAGCT TATATTGAAG CCGGAGAATT TGCTCCTGGC TCTATGTTAC CTAAGGTACA GGCTGCTTTG CAGTTTGCAC AGTCTGGCGA AGGACGTACA TCACTTATTA CTTTGCTGGA TAAGGCTGCT GATGGAATTG CTGGAAAAAC CGGTACTGTG ATACGCGGAT AG
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Protein sequence | MGKRIVIALG GNALGKNLPE QMIAVKHTAK AIVDLIEQGN EVIIAHGNGP QVGMIQEAMT QLNRSDPEKY IPCPLSVCVA MSQGYIGYDL QNALREEMLN RGIKKNAATV LTQVEVDKND PAFKNPTKPI GSFMTEEEAK KMVAERGYNI VEDAGRGYRR VVASPQPVAI VELDTIRSLI ETGNVVIACG GGGIPVFITE GNHLKGAAAV IDKDFAAARL AEQVNADALI ILTAVEKVAI HFGTPEQEDL SELTPESAQA YIEAGEFAPG SMLPKVQAAL QFAQSGEGRT SLITLLDKAA DGIAGKTGTV IRG
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