| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0172 |
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| Symbol | |
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| ID | 8413020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 198078 |
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| End bp | 198899 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645021744 |
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| Product | Transketolase domain protein |
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| Protein accession | YP_003179199 |
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| Protein GI | 257783982 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3959] Transketolase, N-terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.906394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTCG ACCTTAAACA GGTTGCTCGT GAGGTGCGCA AAAGCATCCT CACGCAGGTT
TTTACGGCCA AATCCGGACA TCCCGGTGGC TCGCTTTCTG CAACAGAAAT CTTGACGTAT
CTCTATTTCA AAGAGATGCA TGTAGACCCC ACCAAGCCAA ATTGCTGCTG CAGGGACCGC
TTTGTGCTCT CAAAGGGTCA CGTTACGCCA GCGCTTTACG GCGTTTTGGC CGAGCGCGGC
TTCTTCCCCA AGGAGGAGCT CAAGACCTTC CGTGCGCTCA ATTCGCGCCT TCAAGGTCAC
CCCAACATGA ACGATACCCC CGGCGTTGAC ATGAGCACCG GCTCTCTGGG CCAGGGTGTC
TCCACTGCCG TTGGTATGGC GCTTGCCGGC AAGAAGTTCA ACAAGGACTA TCGCGTCTAT
GCACTTCTGG GCGACGGTGA GATTGAGGAG GGTCAGGTCT GGGAGGCCGC AATGTTTGCA
GGCAACCACC AGCTTGATAA CCTCACGCTT ATTGTTGATA ACAACAATCT GCAGCTTGAT
GGCACACTTG AGCAGATTAA CACGCCGCAG CCAATTGGCG AGAAGTTCAA GGCGTTTAAA
TTCCACGTTA TTGAAGTGGC GGATGGACAC GACTTTGATC AGCTTGCAGC GGCATTTGCT
GAGGCTCGTA CCATTAAGGG TCAGCCGACC GTTATTATCG CCCACACCGT AAAGGGCAAA
GGCGTCTCCT TCATGGAGAA CCAGGTAGGC TGGCACGGCA AGGCTCCTAA CCAGGAGCAA
TACGAGCAGG CTATGAAAGA GCTTGAGGGA GAGGTGGCAT AA
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| Protein sequence | MDVDLKQVAR EVRKSILTQV FTAKSGHPGG SLSATEILTY LYFKEMHVDP TKPNCCCRDR
FVLSKGHVTP ALYGVLAERG FFPKEELKTF RALNSRLQGH PNMNDTPGVD MSTGSLGQGV
STAVGMALAG KKFNKDYRVY ALLGDGEIEE GQVWEAAMFA GNHQLDNLTL IVDNNNLQLD
GTLEQINTPQ PIGEKFKAFK FHVIEVADGH DFDQLAAAFA EARTIKGQPT VIIAHTVKGK
GVSFMENQVG WHGKAPNQEQ YEQAMKELEG EVA
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