| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0077 |
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| Symbol | |
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| ID | 8412920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 87003 |
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| End bp | 87722 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 645021644 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_003179104 |
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| Protein GI | 257783887 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAT ACGACCTTAT TGTTCAAGAT ATAAAGCAAG ATATCTCCCT GGGTACCTAC
CCAGCATATT CTCGCCTACC TTCTGTAGCT CAGCTTTGTC AACAATATGA AGTGAGCAAG
ATTACCATTA ACAAGGCACT TGAAGTGCTA GAACAACAAG GTCTTATCTT TAGACGTAAG
GGTTCGGGCA CATTTGTAAA AAAACTTGAA GAAGGAACTC AAATACGTCC GAGTAAAGAA
GTCTCCGGAC AAATGGAAGG TTTCATGGCT GAGCATACCG CTCGTGGTGA ACGTGTCAAA
TCTATTGTAT ATACCTTTGA GGTTCAGCAT CCATCAGAAT ACATTGCCAA AGCATTGGAT
ATTAGTCCTG AAGATTTTGT ATACCGCATT GTACGTGTAC GCATTGTTGA TGATGTTTCA
CAAGTTATTG AATACACCTA TATGCCTATC GGTTTAATTC CAAATCTTAA AATGAAACAT
CTTGAGCATT CGATATATGC ATATATTGAG AATACCCTTG AGCTTCGTAT TGCCAACGCT
CACCGTGTCA TTAGAGCAGT CATGCCAACC ACTCTTGAAG CTGAGCGTCT TTCTATAACT
CCAAATGAAC CTCTACTTGA AGTTGAACAA ATAGGTTATA TCGATGACGG CCGTGCTTTT
GAATATTCTG TTGCACGCCA TGCTCATGGC TATGAATTCA TGACTATTTC TATGCACTAG
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| Protein sequence | MNKYDLIVQD IKQDISLGTY PAYSRLPSVA QLCQQYEVSK ITINKALEVL EQQGLIFRRK
GSGTFVKKLE EGTQIRPSKE VSGQMEGFMA EHTARGERVK SIVYTFEVQH PSEYIAKALD
ISPEDFVYRI VRVRIVDDVS QVIEYTYMPI GLIPNLKMKH LEHSIYAYIE NTLELRIANA
HRVIRAVMPT TLEAERLSIT PNEPLLEVEQ IGYIDDGRAF EYSVARHAHG YEFMTISMH
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