| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0068 |
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| Symbol | |
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| ID | 8412910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 76677 |
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| End bp | 78035 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645021634 |
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| Product | natural resistance-associated macrophage protein |
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| Protein accession | YP_003179095 |
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| Protein GI | 257783878 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAAAC AGGATCATCT CCTCAAAAAT TCAAGAGACC CACAACAAGA CGTTGTCACC
TCACACCAAA ATGCAAGCCA AAATATAGTA GATTCAAATC CATCTGAGAT GGTTGCTTCT
AAAAAAACAA ACGTTAACAA GAGCAGCTTA AAATATATTT TACTTGCGAT GGGTCCAGGT
CTTCTTGCTG CCTTTGCTGG AAACGACGCT GGCGGTATTG CAACCTATTC AAGCGCAGGC
GCCACTTTTG GTTATTCCCA GCTGTGGACC GTGCCACTCA TGTGCTTTCT GCTCATTGTT
GTTCAAGAAA CCGCAGCTCG AATGGGTTGT GTTACTGGTA AGGGCATTGC ATCACTGGTA
CGTGAGCGCT TTGGTATCCG CTTGTCCACG CTGGCAATGG GAGCACTGCT GCTCTCCAAC
ATTGCGGTTA CCTTCTCCGA ATTCGCAGGT ATTGCGTCCA GTATGGAGCT CTTTGGCATT
CCGACGTATG TATCAGTACC TATTAGCGCT CTGATGGTTT GGCTTTTAAC CGTTGGTGGA
TCTTATCGCC GTATTGAGAA AATACTATTA GCCATCAGTT GTATTTTTGT CACATACATC
ATTGCAGGTA TACTTGCACA ACCTGATTGG GCAGAGGCGT TTCGAGTAAC CATAATTCCT
CAACCTTCCA GCGATCCCTC ATATATCTCG CTGCTAGTCG CAAACATTGG TACCACCATC
AGTCCGTACA TGATCTTCTT GGTTGCATCA AATGTTGTCG AGAAAAACCT TGATACCAGC
GATATTCCTG CTCAGCGTGC AGATAATGTT GCGGGCGCCA TTTTGGCCGA AATCATTACC
TGGTTCATCA TGCTGACCAC TGGTGCCGTG CTCTTCCCTC GCGGAATCTC TGTTGACTCC
GCTGCCGATG CTGCTCGCGC CCTTGAACCA CTTGCAGGTC AGTATGCAAG TACGCTTTTT
GCGTTGGGCA TGGTTGGCGC ATCCTTCTTA GCAGCATGCG TTCTACCAGG CATTACCGCA
AGTGCTATCT GCGAGGCTTT TGGTTGGGAG CGCGGAGCTG ATCGCAGCTG GCAGGAAGCT
CCCGTCTACC ACAGCATTAT TACAACTGTA CTAGTTATTT CTGCGCTTGT TGTTCTGATT
CCGGGTATGA GCCTCTTTGG TATCATGATG GCTGCCCAGG TCATCAATGG TATCCTGTTG
CCAATTCTGC TCATCTTTAT GGTTATTATT GCAGCCGACA AACACATCAT GGGCAAGTAC
GCCAACGGTC GCATATGGAA CGCGTTGACC TGGTTCACCA TCGTCACCGT TATCATCCTG
ACCATCGTGA TGTTCATTCT GCAGGCCATG GGCTTATAG
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| Protein sequence | MVKQDHLLKN SRDPQQDVVT SHQNASQNIV DSNPSEMVAS KKTNVNKSSL KYILLAMGPG
LLAAFAGNDA GGIATYSSAG ATFGYSQLWT VPLMCFLLIV VQETAARMGC VTGKGIASLV
RERFGIRLST LAMGALLLSN IAVTFSEFAG IASSMELFGI PTYVSVPISA LMVWLLTVGG
SYRRIEKILL AISCIFVTYI IAGILAQPDW AEAFRVTIIP QPSSDPSYIS LLVANIGTTI
SPYMIFLVAS NVVEKNLDTS DIPAQRADNV AGAILAEIIT WFIMLTTGAV LFPRGISVDS
AADAARALEP LAGQYASTLF ALGMVGASFL AACVLPGITA SAICEAFGWE RGADRSWQEA
PVYHSIITTV LVISALVVLI PGMSLFGIMM AAQVINGILL PILLIFMVII AADKHIMGKY
ANGRIWNALT WFTIVTVIIL TIVMFILQAM GL
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