Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0046 |
Symbol | |
ID | 8412888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 50610 |
End bp | 51242 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 645021613 |
Product | hypothetical protein |
Protein accession | YP_003179074 |
Protein GI | 257783857 |
COG category | [S] Function unknown |
COG ID | [COG4832] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTTG ATTTCAAAAA GGAATTTAAA GAGCTGTATG CCCCAAAAAA TAAACCAAGC ATAGTAAAAG TTCCACGTAT CAACTATCTT GCGGTAAGAG GATTTGGAGA TCCCAACGTA GAAGATGGTG AATATAAACA GTCAATAGGT CTGCTTTACG GCGTTGCTTA TGCCATCAAA ATGAGCAAAA AGAGTACACA TCATATTGAA GGATATTTTG ATTTTGTTGT TCCTCCATTA GAGGGCTTCT GGTGGCAAGA GGATACTCAG GGCGTTGATT ACGCACATAA AGAAAACTTC AAGTGGATTT CAGTTATTCG CCTACCTGAC TTTGTTACCA AAGAGGATTT TGATTGGTCC GTTGCTGAAG CAACTAAGAA AAAGAAGCTA GATTTTTCTA AGGTAGAGTT CTTTACCTAT GATGAAGGTC TCTGTGTACA GTGCATGCAT ATTGGACCCT ATAATAGTGA ACCCGAAACT GTTTCTCTTA TGCATGAATA TATGGAGAGC CAGGGATACG TTTTAGACAT CACTGCTGAG CGCATGCATC ATGAAGTTTA TCTGAGCGAT GTACGTAAAA TAGCTCCAGA GAAACTAAAG ACTGTCATCA GACATCCAAT CAGAGAGGTC TAA
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Protein sequence | MAFDFKKEFK ELYAPKNKPS IVKVPRINYL AVRGFGDPNV EDGEYKQSIG LLYGVAYAIK MSKKSTHHIE GYFDFVVPPL EGFWWQEDTQ GVDYAHKENF KWISVIRLPD FVTKEDFDWS VAEATKKKKL DFSKVEFFTY DEGLCVQCMH IGPYNSEPET VSLMHEYMES QGYVLDITAE RMHHEVYLSD VRKIAPEKLK TVIRHPIREV
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